##gff-version 3
#species: Drosophila virilis
#assembly-id: CAF1
#annotation-group: MAKA (see Mount, Gotea, Lin, Hernandez and Makalowski. 2007. "Spliceosomal small nuclear RNA genes in 11 insect genomes." RNA 13:5-14.)
#algorithm: SPR (SPliceosomal RNA; BLASTN 2.2.10 + MFOLD 3.1.2 + manual)
#authors: smount@umd.edu, vgotea@psu.edu, cxl46@psu.edu, wojtek@psu.edu
dvir_scaffold_12963	blastn+mfold+man	snRNA	1581664	1581828	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000313;Name=snRNA:U1:1
dvir_scaffold_13047	blastn+mfold+man	snRNA	11554832	11554996	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000314;Name=snRNA:U1:2
dvir_scaffold_13047	blastn+mfold+man	snRNA	11555902	11556066	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000315;Name=snRNA:U1:3
dvir_scaffold_13047	blastn+mfold+man	snRNA	18360262	18360426	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000316;Name=snRNA:U1:4
dvir_scaffold_13047	blastn+mfold+man	snRNA	18383235	18383399	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000317;Name=snRNA:U1:5
dvir_scaffold_13047	blastn+mfold+man	snRNA	18385312	18385476	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000318;Name=snRNA:U1:6
dvir_scaffold_13049	blastn+mfold+man	snRNA	4114250	4114510	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000319;Name=snRNA:U11:1
dvir_scaffold_13049	blastn+mfold+man	snRNA	3740471	3740674	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000320;Name=snRNA:U12:1
dvir_scaffold_4534	blastn+mfold+man	snRNA	2465	2656	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000321;Name=snRNA:U2:1
dvir_scaffold_12723	blastn+mfold+man	snRNA	3577555	3577746	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000322;Name=snRNA:U2:2
dvir_scaffold_12723	blastn+mfold+man	snRNA	3580081	3580272	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000323;Name=snRNA:U2:3
dvir_scaffold_12723	blastn+mfold+man	snRNA	4946228	4946419	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000324;Name=snRNA:U2:4
dvir_scaffold_12963	blastn+mfold+man	snRNA	1451479	1451670	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000325;Name=snRNA:U2:5
dvir_scaffold_12963	blastn+mfold+man	snRNA	1460567	1460758	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000326;Name=snRNA:U2:6
dvir_scaffold_12963	blastn+mfold+man	snRNA	1498594	1498785	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000327;Name=snRNA:U2:7
dvir_scaffold_13049	blastn+mfold+man	snRNA	138788	138979	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000328;Name=snRNA:U2:8
dvir_scaffold_12963	blastn+mfold+man	snRNA	1453431	1453573	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000329;Name=snRNA:U4:1
dvir_scaffold_12963	blastn+mfold+man	snRNA	3476760	3476902	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000330;Name=snRNA:U4:2
dvir_scaffold_12963	blastn+mfold+man	snRNA	3499068	3499208	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000331;Name=snRNA:U4:3
dvir_scaffold_12855	blastn+mfold+man	snRNA	7878541	7878705	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000332;Name=snRNA:U4atac:1
dvir_scaffold_13047	blastn+mfold+man	snRNA	9508539	9508702	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000333;Name=snRNA:U4atac:2
dvir_scaffold_12723	blastn+mfold+man	snRNA	3549536	3549661	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000334;Name=snRNA:U5:1
dvir_scaffold_12723	blastn+mfold+man	snRNA	3577234	3577358	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000335;Name=snRNA:U5:2
dvir_scaffold_12963	blastn+mfold+man	snRNA	1451900	1452025	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000336;Name=snRNA:U5:3
dvir_scaffold_12963	blastn+mfold+man	snRNA	1460212	1460337	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000337;Name=snRNA:U5:4
dvir_scaffold_12963	blastn+mfold+man	snRNA	1498243	1498369	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000338;Name=snRNA:U5:5
dvir_scaffold_13049	blastn+mfold+man	snRNA	139218	139339	.	+	.	ID=Dvir\GJ_MAKA_SPR_26000339;Name=snRNA:U5:6
dvir_scaffold_12855	blastn+mfold+man	snRNA	8976167	8976273	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000340;Name=snRNA:U6:1
dvir_scaffold_13047	blastn+mfold+man	snRNA	4287042	4287148	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000341;Name=snRNA:U6:2
dvir_scaffold_13047	blastn+mfold+man	snRNA	4288183	4288289	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000342;Name=snRNA:U6:3
dvir_scaffold_12723	blastn+mfold+man	snRNA	2311730	2311827	.	-	.	ID=Dvir\GJ_MAKA_SPR_26000343;Name=snRNA:U6atac:1