##gff-version 3 #species: Drosophila persimilis #assembly-id: CAF1 #annotation-group: MAKA (see Mount, Gotea, Lin, Hernandez and Makalowski. 2007. "Spliceosomal small nuclear RNA genes in 11 insect genomes." RNA 13:5-14.) #algorithm: SPR (SPliceosomal RNA; BLASTN 2.2.10 + MFOLD 3.1.2 + manual) #authors: smount@umd.edu, vgotea@psu.edu, cxl46@psu.edu, wojtek@psu.edu dper_scaffold_0 blastn+mfold+man snRNA 7528057 7528220 . - . ID=Dper\GL_MAKA_SPR_26000157;Name=snRNA:U1:1 dper_scaffold_0 blastn+mfold+man snRNA 7529189 7529353 . + . ID=Dper\GL_MAKA_SPR_26000158;Name=snRNA:U1:2 dper_scaffold_0 blastn+mfold+man snRNA 7531218 7531382 . + . ID=Dper\GL_MAKA_SPR_26000159;Name=snRNA:U1:3 dper_scaffold_0 blastn+mfold+man snRNA 7550821 7550985 . - . ID=Dper\GL_MAKA_SPR_26000160;Name=snRNA:U1:4 dper_scaffold_0 blastn+mfold+man snRNA 7553058 7553222 . - . ID=Dper\GL_MAKA_SPR_26000161;Name=snRNA:U1:5 dper_scaffold_0 blastn+mfold+man snRNA 7554807 7554971 . - . ID=Dper\GL_MAKA_SPR_26000162;Name=snRNA:U1:6 dper_scaffold_7 blastn+mfold+man snRNA 3236048 3236212 . + . ID=Dper\GL_MAKA_SPR_26000163;Name=snRNA:U1:7 dper_scaffold_9 blastn+mfold+man snRNA 3264965 3265277 . - . ID=Dper\GL_MAKA_SPR_26000164;Name=snRNA:U11:1 dper_scaffold_40 blastn+mfold+man snRNA 716450 716706 . + . ID=Dper\GL_MAKA_SPR_26000165;Name=snRNA:U12:1 dper_scaffold_5 blastn+mfold+man snRNA 4590384 4590575 . - . ID=Dper\GL_MAKA_SPR_26000166;Name=snRNA:U2:1 dper_scaffold_5 blastn+mfold+man snRNA 4606829 4607020 . - . ID=Dper\GL_MAKA_SPR_26000167;Name=snRNA:U2:2 dper_scaffold_10 blastn+mfold+man snRNA 3026315 3026506 . - . ID=Dper\GL_MAKA_SPR_26000168;Name=snRNA:U2:3 dper_scaffold_10 blastn+mfold+man snRNA 3130529 3130720 . + . ID=Dper\GL_MAKA_SPR_26000169;Name=snRNA:U2:4 dper_scaffold_10 blastn+mfold+man snRNA 3132902 3133093 . + . ID=Dper\GL_MAKA_SPR_26000170;Name=snRNA:U2:5 dper_scaffold_10 blastn+mfold+man snRNA 3163957 3164148 . + . ID=Dper\GL_MAKA_SPR_26000171;Name=snRNA:U2:6 dper_scaffold_10 blastn+mfold+man snRNA 3168565 3168756 . - . ID=Dper\GL_MAKA_SPR_26000172;Name=snRNA:U2:7 dper_scaffold_10 blastn+mfold+man snRNA 2298470 2298622 . - . ID=Dper\GL_MAKA_SPR_26000173;Name=snRNA:U4:1 dper_scaffold_10 blastn+mfold+man snRNA 2319082 2319224 . - . ID=Dper\GL_MAKA_SPR_26000174;Name=snRNA:U4:2 dper_scaffold_10 blastn+mfold+man snRNA 3028762 3028903 . - . ID=Dper\GL_MAKA_SPR_26000175;Name=snRNA:U4:3 dper_scaffold_3 blastn+mfold+man snRNA 4555472 4555636 . + . ID=Dper\GL_MAKA_SPR_26000176;Name=snRNA:U4atac:1 dper_scaffold_7 blastn+mfold+man snRNA 256846 256973 . + . ID=Dper\GL_MAKA_SPR_26000177;Name=snRNA:U5:1 dper_scaffold_10 blastn+mfold+man snRNA 3027267 3027393 . + . ID=Dper\GL_MAKA_SPR_26000178;Name=snRNA:U5:2 dper_scaffold_10 blastn+mfold+man snRNA 3031274 3031405 . - . ID=Dper\GL_MAKA_SPR_26000179;Name=snRNA:U5:3 dper_scaffold_10 blastn+mfold+man snRNA 3129974 3130101 . - . ID=Dper\GL_MAKA_SPR_26000180;Name=snRNA:U5:4 dper_scaffold_10 blastn+mfold+man snRNA 3163248 3163375 . - . ID=Dper\GL_MAKA_SPR_26000181;Name=snRNA:U5:5 dper_scaffold_10 blastn+mfold+man snRNA 3169835 3169962 . + . ID=Dper\GL_MAKA_SPR_26000182;Name=snRNA:U5:6 dper_scaffold_29 blastn+mfold+man snRNA 187396 187519 . + . ID=Dper\GL_MAKA_SPR_26000183;Name=snRNA:U5:7 dper_scaffold_6 blastn+mfold+man snRNA 6114548 6114654 . - . ID=Dper\GL_MAKA_SPR_26000184;Name=snRNA:U6:1 dper_scaffold_6 blastn+mfold+man snRNA 6115264 6115370 . - . ID=Dper\GL_MAKA_SPR_26000185;Name=snRNA:U6:2 dper_scaffold_6 blastn+mfold+man snRNA 6116064 6116170 . - . ID=Dper\GL_MAKA_SPR_26000186;Name=snRNA:U6:3 dper_scaffold_5 blastn+mfold+man snRNA 1143525 1143621 . + . ID=Dper\GL_MAKA_SPR_26000187;Name=snRNA:U6atac:1