##gff-version 3
#species: Drosophila melanogaster
#assembly-id: CAF1
#annotation-group: MAKA (see Mount, Gotea, Lin, Hernandez and Makalowski. 2007. "Spliceosomal small nuclear RNA genes in 11 insect genomes." RNA 13:5-14.)
#algorithm: SPR (SPliceosomal RNA; BLASTN 2.2.10 + MFOLD 3.1.2 + manual)
#authors: smount@umd.edu, vgotea@psu.edu, cxl46@psu.edu, wojtek@psu.edu
dmel_chr2L	blastn+mfold+man	snRNA	901491	901654	.	-	.	ID=Dmel\CR_MAKA_SPR_26000099;Name=snRNA:U1:1
dmel_chr3R	blastn+mfold+man	snRNA	773655	773818	.	-	.	ID=Dmel\CR_MAKA_SPR_26000100;Name=snRNA:U1:2
dmel_chr3R	blastn+mfold+man	snRNA	19652056	19652219	.	+	.	ID=Dmel\CR_MAKA_SPR_26000101;Name=snRNA:U1:3
dmel_chr3R	blastn+mfold+man	snRNA	19653592	19653755	.	+	.	ID=Dmel\CR_MAKA_SPR_26000102;Name=snRNA:U1:4
dmel_chr3R	blastn+mfold+man	snRNA	19685189	19685352	.	-	.	ID=Dmel\CR_MAKA_SPR_26000103;Name=snRNA:U1:5
dmel_chr3L	blastn+mfold+man	snRNA	3876588	3876862	.	-	.	ID=Dmel\CR_MAKA_SPR_26000104;Name=snRNA:U11:1
dmel_chr3L	blastn+mfold+man	snRNA	16619028	16619265	.	+	.	ID=Dmel\CR_MAKA_SPR_26000105;Name=snRNA:U12:1
dmel_chr2L	blastn+mfold+man	snRNA	13211925	13212116	.	-	.	ID=Dmel\CR_MAKA_SPR_26000106;Name=snRNA:U2:1
dmel_chr2L	blastn+mfold+man	snRNA	13215839	13216030	.	+	.	ID=Dmel\CR_MAKA_SPR_26000107;Name=snRNA:U2:2
dmel_chr2L	blastn+mfold+man	snRNA	13244370	13244561	.	-	.	ID=Dmel\CR_MAKA_SPR_26000108;Name=snRNA:U2:3
dmel_chr2L	blastn+mfold+man	snRNA	19808575	19808765	.	+	.	ID=Dmel\CR_MAKA_SPR_26000109;Name=snRNA:U2:4
dmel_chr2L	blastn+mfold+man	snRNA	19811543	19811734	.	-	.	ID=Dmel\CR_MAKA_SPR_26000110;Name=snRNA:U2:5
dmel_chrX	blastn+mfold+man	snRNA	16088609	16088800	.	+	.	ID=Dmel\CR_MAKA_SPR_26000111;Name=snRNA:U2:6
dmel_chr2L	blastn+mfold+man	snRNA	5565619	5565766	.	+	.	ID=Dmel\CR_MAKA_SPR_26000112;Name=snRNA:U4:1
dmel_chr2L	blastn+mfold+man	snRNA	19806663	19806804	.	+	.	ID=Dmel\CR_MAKA_SPR_26000113;Name=snRNA:U4:2
dmel_chr2L	blastn+mfold+man	snRNA	21202629	21202771	.	-	.	ID=Dmel\CR_MAKA_SPR_26000114;Name=snRNA:U4:3
dmel_chr3R	blastn+mfold+man	snRNA	1020726	1020885	.	-	.	ID=Dmel\CR_MAKA_SPR_26000115;Name=snRNA:U4atac:1
dmel_chr2L	blastn+mfold+man	snRNA	3048702	3048831	.	+	.	ID=Dmel\CR_MAKA_SPR_26000116;Name=snRNA:U5:1
dmel_chr2L	blastn+mfold+man	snRNA	13244849	13244974	.	+	.	ID=Dmel\CR_MAKA_SPR_26000117;Name=snRNA:U5:2
dmel_chr2L	blastn+mfold+man	snRNA	15747486	15747611	.	-	.	ID=Dmel\CR_MAKA_SPR_26000118;Name=snRNA:U5:3
dmel_chr2L	blastn+mfold+man	snRNA	19807877	19808002	.	-	.	ID=Dmel\CR_MAKA_SPR_26000119;Name=snRNA:U5:4
dmel_chr2L	blastn+mfold+man	snRNA	19812343	19812469	.	+	.	ID=Dmel\CR_MAKA_SPR_26000120;Name=snRNA:U5:5
dmel_chr3L	blastn+mfold+man	snRNA	3074333	3074455	.	+	.	ID=Dmel\CR_MAKA_SPR_26000121;Name=snRNA:U5:6
dmel_chrX	blastn+mfold+man	snRNA	16087923	16088051	.	-	.	ID=Dmel\CR_MAKA_SPR_26000122;Name=snRNA:U5:7
dmel_chr3R	blastn+mfold+man	snRNA	20381810	20381916	.	+	.	ID=Dmel\CR_MAKA_SPR_26000123;Name=snRNA:U6:1
dmel_chr3R	blastn+mfold+man	snRNA	20382414	20382520	.	+	.	ID=Dmel\CR_MAKA_SPR_26000124;Name=snRNA:U6:2
dmel_chr3R	blastn+mfold+man	snRNA	20382937	20383043	.	+	.	ID=Dmel\CR_MAKA_SPR_26000125;Name=snRNA:U6:3
dmel_chr2L	blastn+mfold+man	snRNA	8389724	8389821	.	+	.	ID=Dmel\CR_MAKA_SPR_26000126;Name=snRNA:U6atac:1