Updated 2.10.05
Note: alignments and other supporting materials may be viewed or downloaded for several of these articles. If you work with these data, please cite the appropriate article, and send me a pdf or reprint of any articles that make use of these data.
Delwiche, C.F. 2005. Voyage to the Bottom of the Tree (Book Review). Science 307:676-677. Full text available online.
Sanchez Puerta, M. V., T. R. Bachvaroff, and C. F. Delwiche. 2005. The complete plastid genome sequence of the haptophyte Emiliania huxleyi: a comparison to other plastid genomes. DNA research. In press.
Bachvaroff, T. R., M. V. Sanchez Puerta, and C. F. Delwiche. 2005. Chlorophyll c containing plastid relationships based on analyses of a multi-gene dataset with all four chromalveolates lineages. Molecular Biology and Evolution. In press. Abstract and full text are available online.
Sánchez Puerta, M. V., T. R. Bachvaroff, and C. F. Delwiche. 2004. The complete mitochondrial genome of the haptophyte Emiliania huxleyi and its relation to heterokonts. DNA Research 11:1-10. Full text, and PDF are available online.
Johnson, M. D., T. Tengs, C. F. Delwiche, D. Oldach, and D. K. Stoecker. 2004. Highly divergent SSU rRNA genes found in marine ciliates Myrionecta rubra and Mesodinium pulex. Protist 155:347-359.
Delwiche, C. F. 2004 The genomic palimpsest: genomics in evolution and ecology. BioScience 54:991-1001.
McCourt, R. M., Delwiche, C. F., and Karol, K. G. 2004. Charophyte algae and land plant origins. Trends. Ecol. Evol. 19:661-666.
Cimino, M. T., J. L. Reveal, and C. F. Delwiche. 2003. (1569-1570) Proposals to conserve the name Coleochaete soluta against C. prostrata and the name C. orbicularis against Phyllactidium pulchellum with a note on the name C. nitellarum (Coleochaetaceae, Chlorophyceae). Taxon 52: 133-134.
Eriksson, T., M. S. Hibbs, C. F. Delwiche, M. J. Donoghue, and A. D. Yoder. 2003. The phylogeny of Rosoideae (Rosaceae) enhanced by combining sequences of the internal transcribed spacers (ITS) of nuclear ribosomal DNA with the trnL/F region of chloroplast DNA. Int. J. Plant Sci 164:197-211.
Charity, J. C., K. Pak, C. F. Delwiche, and S. W. Hutcheson. 2003. Novel exchangable effector loci associated with Pseudomonas syringae hrp pathogenicity island: evidence for integron-like assembly from transposed gene casettes. Molecular Plant Microbe Interactions 16: 495-507.
Bachvaroff, T. R., G. T. Concepcion, C. R. Rogers, E. M. Herman, and C. F. Delwiche. 2003. Dinoflagellate EST data indicate massive transfer of genes to the nuclear genome. Protist 155: 65-78. [PDF]
Cimino, M.T., and C.F. Delwiche. 2002. Molecular and morphological data identify a cryptic species complex in endophytic members of the genus Coleochaete Breb. (Coleochaetales, Charophyta). J. Phycol. 38:1213-1221.
Delwiche, C. F., K. G. Karol, M. T. Cimino, and K. J. Sytsma. 2002. Phylogeny of the genus Coleochaete (Charophyceae, Chlorophyta) and related taxa inferred by analysis of the chloroplast gene rbcL. Journal of Phycology 38: 394-403.
Karol, K. G., R. M. McCourt, M. T. Cimino, and C. F. Delwiche. 2001. The closest living relatives of plants. Science 294: 2351-2353. Abstract and full text available online here
Tengs, T., O. J. Dahlberg, K. Shalchian-Tabrizi, D. Klaveness, K. Rudi, C. F. Delwiche, and K. S. Jakobsen. 2000. Phylogenetic analyses indicate that the 19 ' hexanoyloxy- fucoxanthin-containing dinoflagellates have tertiary plastids of haptophyte origin. Molecular Biology and Evolution 17: 718-729.
Oldach, D. W., C. F. Delwiche, K. S. Jakobsen, T. Tengs, E. G. Brown, J. W. Kempton, E. F. Schaefer, H. A. Bowers, H. B. Glasgow, J. M. Burkholder, K. A. Steidinger, and P. A. Rublee. 2000. Heteroduplex mobility assay-guided sequence discovery: Elucidation of the small subunit (18S) rDNA sequences of Pfiesteria piscicida and related dinoflagellates from complex algal culture and environmental sample DNA pools. Proceedings of the National Academy of Sciences of the United States of America 97: 4303-4308.
Cimino, M. T., K. G. Karol, and C. F. Delwiche. 2000. An artifact in the small subunit rDNA sequence of Chaetosphaeridium globosum (Charophyceae, Streptophyta). Journal of Phycology 36: 440-442.
Delwiche, C.F. 1999. Tracing the web of plastid diversity through the tapestry
of life. American Naturalist 154:S164-S177.
Click here for a modified figure.
Roos, D., and C.F. Delwiche. 1998. Endosymbiosis: cyclical and permanent in evolution (Response). Trends Microbiol. 343:345-346.
Delwiche, C.F., and J.D. Palmer. 1997. The origin of plastids and their spread via secondary symbiosis. In: D. Bhattacharya (ed.), The Origins of Algae and their Plastids. Springer-Verlag.
Palmer, J.D., and C.F. Delwiche. 1997. The origin of plastids and their genomes. In: P.S. Soltis, D.E. Soltis, and J.J. Doyle, eds. Molecular Systematics of Plants, 2nd edition. Chapman and Hall/Kluwer.
Chapman, R.L., M.A. Buchheim, C.F. Delwiche, T. Friedl, V.A.R. Huss, K.G. Karol, L.A. Lewis, J. Manhart, R.M. McCourt, J.L. Olsen, and D.A. Waters. 1997. Molecular systematics of the green algae. In: P.S. Soltis, D.E. Soltis, and J.J. Doyle, eds. Molecular Systematics of Plants, 2nd edition. Chapman and Hall (in press).
Kohler, S., C.F. Delwiche, L.G. Tilney, P. Webster, R.J.M. Wilson, J.D. Palmer, and D.S. Roos. 1997. A plastid of probable green algal origin in apicomplexan plastids. Science 275:1485-1489. Click here for full text, the abstract, or alignment, and ancillary materials.
Palmer, J.D., and C.F. Delwiche. 1996. Second-hand chloroplasts and the case of the disappearing nucleus. (Commentary) Proc. Natl. Acad. Sci. USA 93: 7432-7435.
Delwiche, C.F., and J. D. Palmer. 1996. Rampant Horizontal Transfer and Duplication of Rubisco Genes in Eubacteria and Plastids. Mol. Biol. Evol. 13:873-882. Click here for abstract, alignment, and ancillary materials.
Barns, S.M., C.F. Delwiche, J.D. Palmer, and N.R. Pace. 1996. Perspectives on archaeal diversity, thermophily and monophyly from environmental rRNA sequences. Proc. Natl. Acad. Sci. USA 93:9188-9193. Click here for abstract, algnment, and ancillary materials
Delwiche, C. F., M. Kuhsel, and J. D. Palmer. 1995. Phylogenetic analysis of tufA sequences indicates a cyanobacterial origin of all plastids. Mol. Phylo. Evol. 4:110-128 Click here for abstract, alignment, and ancillary materials.
Mishler, B.D., L.A. Lewis, M.A. Buchheim, K. S. Renzaglia, D. J. Garbarz, C. F. Delwiche, F. W. Zechman, T. S. Kantz, and R. L. Chapman. 1994. Phylogenetic relationships of the "green algae" and "bryophytes". Ann. Missouri Bot. Gard. 81:451-483.
Delwiche, C. F. and T. D. Sharkey. 1993. Rapid appearance of 13C in biogenic isoprene when 13CO2 is fed to intact leaves. Plant, Cell, and Environment 16:587-591.
Morden, C. W., C. F. Delwiche, M. Kuhsel, and J. D. Palmer. 1992. Gene Phylogenies and the endosymbiotic origin of plastids. Biosystems 28:75-90.
Graham, L. E., C. F. Delwiche, and B. Mishler. 1991. Phylogenetic connections between the "green algae" and "bryophytes." Advances in Bryology 4:213-244.
Sharkey, T. D., F. Loreto, and C. F. Delwiche. 1991. The biochemistry of isoprene emission from leaves during photosynthesis. In: Trace Gas Emissions by Plants, T. D. Sharkey, H. A. Mooney, and E. A. Holland (eds.). Academic Press, San Diego, pp. 153-184.
Sharkey, T. D., F. Loreto, and C. F. Delwiche. 1991. High carbon dioxide and sun/shade effects on isoprene emission from oak and aspen tree leaves. Plant, Cell, and Environment 14:333-338.
Sharkey, T. D., F. Loreto, C. F. Delwiche, and I. W. Treichel. 1991. Fractionation of Carbon Isotopes during Biogenesis of Atmospheric Isoprene. Plant Physiology 97:463-466.
Delwiche, C.F., L.E. Graham and N. Thomson. 1989. Lignin-like compounds and sporopollenin in Coleochaete, an algal model for land plant ancestry. Science 245:399-401.
