#NEXUS BEGIN DATA; DIMENSIONS NTAX=56 NCHAR=427; FORMAT MISSING=X GAP=. INTERLEAVE DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" ; [!tufA alignment from: Delwiche, Kuhsel and Palmer (1995) Mol. Phylog. Evol. 4:110-128] MATRIX [ 10 20 30 40 50] [ . . . . .] thermotoga MAKEKFVRTKPHVNVGTIGHIDHGKSTLTAAITKYL...SLKVLAQYIPY [47] ChlamydiaB MSKETFQRNKPHINIGAIGHVDHGRTTLTAAITRTL...SGDGLADFRDY [47] thermus_th MAKGEFVRTKPHVNVGTIGHVDHGKTTLTAALTYVA..AAENPNVEVKDY [48] thermus_aq MAKGEFIRTKPHVNVGTIGHVDHGKTTLTAALTYVA..AAENPNVEVKDY [48] deinonema MAKGTFERTKPHVNVGTIGHVDHGKTTLTAAITFTA..AASDPTIEKLAY [48] flexistipes MSKQKYERKKPHVNVGTIGHVDHGKTTLTAAMTHVL...SLKGYADYIEF [47] borrelia_b MAKEVFQRTKPHMNVGTIGHVDHGKTTLTAAISIYC..SKLNKDAKALKY [48] bacteroides MAKEKFERTKPHVNIGTIGHVDHGKTTLTAAITTVL...AKKGLSELRSF [47] pseudomonas MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAITTVL...TKKFGGEAKAY [47] e_coli MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVL...AKTYGGAARAF [47] salmonella VSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVL...AKTYGGAARAF [47] shewanella VAKAKFERIKPHVNVGTIGHVDHGKTTLTAAISHVL...AKTYGGEAKDF [47] bacillus MAKEKFDRSKSHANIGTIGHVDHGKTTLTAAITTVL..HKKSGKGTAMAY [48] mycoplasma_genit MAREKFDRSKPHVNVGTIGHIDHGKTTLTAAICTVL...AKEGKSAATRY [47] streptococcus MAKEKYDRSKPHVNIGTIGHVDHGKTTLTAAITTVLARRLPSAVNQPKDY [50] micrococcus MAKAKFERTKAHVNIGTIGHVDHGKTTLTAAISKVLYDKYP.DLNEARDF [49] mycobacterium MAKAKFQRTKPHVNIGTIGHVDHGKTTLTAAITKVLHDKFP.DLNETKAF [49] gloeobacter XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] prochlorothrix XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] phormidium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] spirulina MARAKFERNKPHVNIGTIGHVDHGKTTLTAAITMTL...AASGGAKARKY [47] anacystis MARAKFERTKPHANIGTIGHVDHGKTTLTAAITTVL...AKAGMAKARAY [47] gloeothece XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] plectonema XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] cyanophora MARQKFDGNKPHVNIGTIGHVDHGKTTLTAAITTAL...ASQGKGKARKY [47] porphyridium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] smithora XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] porphyra MARSKFERKKPHVNIGTIGHVDHGKTTLTAAISATL...STLGSTAAKKF [47] gracilaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] vaucheria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] costaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] laminaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] odontella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] coscinodiscus XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] cyclotella MGPEKFARAKPHINIGTIGHVDHGKTTFTAAITATL...ANDGESFAKAY [47] ochromonas XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] cryptomonas MARDKFERFKPHVNIGTIGHVDHGKTTLTAAISATL....SQYTGKSKKF [46] euglena MARQKFERTKPHINIGTIGHVDHGKTTLTAAITMAL...AATGNSKAKRY [47] astasia MSRQKFERIKPHINIGTIGHVDHGKTTLTAAITMAL...SVTGNTKSKKY [47] mantoniella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] pandorina XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] chlamydomoas MSRAKFERKKPHVNIGTIGHVDHGKTTLTAAITMTL...AAAGGSVGKKY [47] gonium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] draparnaldia XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] chlorella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] codium MIREKFERIKPHLNIGTIGHVDHGKTTLTAAITMAL...AVKGYTKAKNY [47] derbesia XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] bryopsis XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] raphidonema XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] coleochaete LLHMTFRNKKIHLNVGTIGHFSHGKTTLTAAITAVL...AGIGYTQPKQN [47] chara MAQEVFQRTKPHVNIGTIGHVDHGKTTLTAAITMTL...AVNSTCTPKKY [47] nitella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] arabidopsis AARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL...ASIGSSVAKKY [47] nicotiana_tabac AARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL...ASMGNSAPKKY [47] nicotiana_syl_a AARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL...ASMGNSAPKKY [47] glycine AARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMAL...AALGNSAPKKY [47] [ 60 70 80 90 100] [ . . . . .] thermotoga DQIDKAPEEKARGITINITHVEYETEKRHYAHIDCPGHADYIKNMITGAA [97] ChlamydiaB SSIDNTPEEKARGIPINASHVEYETANRHYAHVDCPCHADYVKNMITGAA [97] thermus_th GDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAA [98] thermus_aq GDIDKAPEERARGITINTAHVEYETAKRHYSHVDCPGHADYIKNMITGAA [98] deinonema DQIDKAPEEKARGITINTAHVEYNTPTRHYSHVDCPGHADYVKNMITGAA [98] flexistipes GNIDKAPEEKERGITIATAHVEYESDKRHYAHVDCPGHADYVKNMITGAA [97] borrelia_b EDIDNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAA [98] bacteroides DSIDNAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMVTGAA [97] pseudomonas DQIDAAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAA [97] e_coli DQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAA [97] salmonella DQIDNAPEEKARGITINTSHVEYDTPTRHYAHVDCPGHADYVKNMITGAA [97] shewanella SQIDNAPEERERGITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAA [97] bacillus DQIDGAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAA [98] mycoplasma_genit DEIDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAA [97] streptococcus ASIDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAA [100] micrococcus ATIDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAA [99] mycobacterium DQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAA [99] gloeobacter XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] prochlorothrix XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] phormidium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] spirulina DDIDAAPEEKQRGITINTAHVEYETEQRHYAHVDCPGHADYVKNMITGAA [97] anacystis ADIDAAPEEKARGITINTAHVEYETGNRHYAHVDCPGHADYVKNMITGAA [97] gloeothece XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] plectonema XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAT [100] cyanophora DEIDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAA [97] porphyridium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] smithora XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] porphyra DEIDAAPEEKARGITINTAHVEYETDNRHYAHVDCPGHADYVKNMITGAA [97] gracilaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] vaucheria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] costaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] laminaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] odontella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] coscinodiscus XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] cyclotella SDIDGAPEERARGITINTAHVEYQTRDRHYAHVDCPGHADYVKNMITGAA [97] ochromonas XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] cryptomonas DEIDSAPEERARGITINTAHVEYETDKWYYAHVDCPGHADYVKNMITGAA [96] euglena EDIDSAPEEKARGITINTAHVEYETKNRHYAHVDCPGHADYVKNMITGAA [97] astasia EEIDSSPEEKARGITINTAHVEYETKNRHYAHVDCPGHADYIKNMITGAA [97] mantoniella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] pandorina XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] chlamydomoas DEIDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAA [97] gonium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] draparnaldia XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] chlorella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] codium MDIDSAPEEKARGITINTAHVEYETDVRHYAHVDCPGHADYVKNMITGAA [97] derbesia XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] bryopsis XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] raphidonema XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] coleochaete DAIDSTSEEKARNMSIYVHHVEYETAAWHYSHLDCPGHVNYINNMITGVS [97] chara DEIDAAPEERARGITINTAHVEYETALRHYAHVDCPGHADYIKNMITGAA [97] nitella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMITGAA [100] arabidopsis DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA [97] nicotiana_tabac DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA [97] nicotiana_syl_a DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA [97] glycine DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAA [97] [ 110 120 130 140 150] [ . . . . .] thermotoga QMDGAILVVAATDGPMPQTREHVLLARQVEVPY.MIVFINKTDMVDDP.. [144] ChlamydiaB QMDGAILVVSATDGAMPQTKEHILLARQVGVPY.IVVFLNKIDMISEEDA [146] thermus_th QMDGAILVVSAADGPMPQTREHILLARQVGVPY.IVVFMNKVDMVDDP.. [145] thermus_aq QMDGAILVVSAADGPMPQTREHILLARQVGVPY.IVVFMNKVDMVDDP.. [145] deinonema QMDGAILVVSSADGPMPQTREHILLARQVGVPY.IVVFMNKVDMVDDE.. [145] flexistipes QMDGAILVVSAADGPMPQTREHILLARQVGVPS.IVVFMNKCDMVDDE.. [144] borrelia_b QMDAAILLVAADSGAEPQTKEHLLLAQRMGIKK.IIVFLNKLDLADPE.. [145] bacteroides QMDGAIIVVAATDGPMPQTREHILLARQVNVPK.LVVFMNKCDMVEDA.. [144] pseudomonas QMDGAILVCSAADGPMPQTREHILLARQVGVPY.IIVFLNKCDSVDDA.. [144] e_coli QMDGAILVVAATDGPMPQTREHILLGRQVGVPY.IIVFLNKCDMVDDE.. [144] salmonella QMDGAILVVAATDGPMPQTREHILLGRQVGVPY.IIVFLNKCDMVDDE.. [144] shewanella QMDGAILVVASTDGPMPQTREHILLSRQVGVPF.IIVFMNKCDMVDDE.. [144] bacillus QMDGAILVVSAADGPMPQTREHILLSKNVGVPY.IVVFLNKCDMVDDE.. [145] mycoplasma_genit QMDGAILVVSATDSVMPQTREHILLARQVGVPK.MVVFLNKCDIASDE.. [144] streptococcus QMDGAILVVASTDGPMPQTREHILLSRQVGVKH.LIVFMNKIDLVDDE.. [147] micrococcus QMDGAILVVAATDGPMAQTREHVLLARQVGVPA.LLVALNKSDMVEDE.. [146] mycobacterium QMDGAILVVAATDGPMPQTREHVLLARQVGVPY.ILVALNKADAVDDE.. [146] gloeobacter QMDGAILVVSAADGPMPQTREHILLARQVGVPN.IVVFLNKKDQLDDP.. [147] prochlorothrix QMDGAILVVSAADGPMPQTREHILLAKRVGVPN.IVVFLNKQDMVDDD.. [147] phormidium QMDGAILVCSAADGPMPQTREHILLSKQVGVPH.IVVFLNKQDQVDDE.. [147] spirulina QMDGAILVVSAADGPMPQTREHILLAKQVGVPS.IVVFLNKADMVDDE.. [144] anacystis QMDGAILVVSAADGPMPQTREHILLAKQVGVPN.IVVFLNKEDMVDDA.. [144] gloeothece QMDGGILVVSAADGPMPQTREHILLAKQVGVPS.LVVFLNKEDQVDDA.. [147] plectonema QMDGAILVVSAADGPMPQTREHILLAGQVGVPN.IVVFMNKQDQVDDE.. [147] cyanophora QMDGAILVVSAADGPMPQTREHILLAKQVGVPN.MVVFLNKEDQIDDA.. [144] porphyridium QMDGAILVVSAADGPMPQTREHILLAKQVGVPQ.VVVFLNKEDQVDDK.. [147] smithora QMDGAILVVSAADGPMPQTREHILLAKQVGVPT.LVVFLNKEDQVDDE.. [147] porphyra QMDGAILVVSAADGPMPQTREHILLAKQVGVPT.LVVFLNKEDQVDDE.. [144] gracilaria QMDGAILVVSAADGPMPQTREHILLAKQVGVPN.IVVFLNKQDQVDDE.. [147] vaucheria QMDGAILVVSAADGPMPQTREHILLAKQVGVPN.IVVFLNKEDQVDDE.. [147] costaria QMDGAILVVSAADGPMPQTREHILLSKQVGVPH.IVVFLNKEDQVDDL.. [147] laminaria QMDGAILVVSAADGPTPQTREHILLSKQVGVPH.IVVFLNKEDQVDDL.. [147] odontella QMDGAILVVSAADGPMPQTREHILLSKQVGVPD.IVVFLNKEDQVDDA.. [147] coscinodiscus HMDGAIIVVSAADGPMPQTREHILLSKQVGVPDMIVVFLNKEDQVDDA.. [148] cyclotella QMDGAILVVSAADGPMPQTREHILLAKQVGVPH.IVVFLNKQDQVDDD.. [144] ochromonas QMDGAILVVSAADGAMPQTREHILLARQVGVKK.LVVFLNKADQVDDP.. [147] cryptomonas QMDGAILVCSAANGPMPQTREHILLAKQVGVPY.IVVFLNKADMVDDE.. [143] euglena QMDGAILVVSAADGPMPQTKEHILLAKQVGVPN.IVVFLNKEDQVDDS.. [144] astasia QMDGAILVISATDGPMPQTKEHILLAKQVGVPN.LVVFLNKEDQIDN... [143] mantoniella QMDGAILVVSGADGPMPQTKEHILLAKQVGVPN.IVVFLNKEDQVDDD.. [147] pandorina QMDGAILVVSGADGPMPQTKEHILLAKQVGVPN.IVVFLNKEDQVDDQ.. [147] chlamydomoas QMDGAILVVSGADGPMPQTKEHILLAKQVGVPN.VVVFLNKEDQVDDK.. [144] gonium QMDGAILVVSGADGPMPQTKEHILLAKQVGVPN.IVVFLNKEDQVDDK.. [147] draparnaldia QMDGAILVVSGADGPMPQTTEHVLLAKQVGVPA.IVVFLNKADQVDDP.. [147] chlorella QMDGAILVVSGADGPMPQTKEHLLLAKQVGVPN.IVVFLNKEDQVDDA.. [147] codium QMDGAILVVSGADGPMPQTKEHILLAKQVGVPA.IVVFLNKADQVDDD.. [144] derbesia QMDGAILVVSGADGPMPQTKEHILLAKQVGVPS.IVVFLNKADQVDDE.. [147] bryopsis QMDGAILVVSGADGPMPQTKEHILLAKQVGVPS.IVVFLNKADQVDDE.. [147] raphidonema RMDGAILVVSGADGPMPQTKEHILLAKQVGVPN.VVVFLNKEDQVDDE.. [147] coleochaete QMDGAILVVSAVDGPMAQTKEHILLAKLLGISS.ILVFINKEDELDDQ.. [144] chara QMDGAILVVSAADGPMPQTKEHILLAKQVGVPS.IVVFLNKEDQVDDE.. [144] nitella QMDGAILVVSAADGPMPQTKEHILLAKQVGVPS.IVVFLNKEDQVDDD.. [147] arabidopsis QMDGAILVVSGADGPMPQTKEHILLAKQVGVPD.MVVFLNKEDQVDDA.. [144] nicotiana_tabac QMDGAILVCSGADGPMPQTKEHILLAKQVGVPN.MVVFLNKQDQVDDE.. [144] nicotiana_syl_a QMDGAILVCSGADGPMPQTKEHILLAKQVGVPN.MVVFLNKQDQVDDE.. [144] glycine QMDGAILVVSGADGPMPQTKEHIILAKQVGVPN.MVVFLNKQDQVDDE.. [144] [ 160 170 180 190 200] [ . . . . .] thermotoga ELIDLVEMEVRDLLSQYGYPGDEVPVIRGSALKAVEAPNDPNHEA..... [189] ChlamydiaB ELVDLVEMELAELLEEKGYKG..CPIIRGSALKALEIEKVRELMQ..... [189] thermus_th ELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEQMHRNPKTRRGENE [195] thermus_aq ELLDLVEMEVRDLLNQYEFPGDEVPVIRGSALLALEEMHKNPKTKRGENE [195] deinonema ELLELVEMEVRELLSKYEFPGDDLPVIKGSALQALEALQANPKTARGEDK [195] flexistipes ELLELVELEIRDLLNTYEFPGDDIPIIKGSALQALENAEDEEK....... [187] borrelia_b .LVELVEVEVLELVEKYGFSA.DTPIIKGSAFGAMSNPEDPES....... [186] bacteroides EMLELVEMEMRELLSFYDFDGDNTPIIQGSALGALN..........GVEK [184] pseudomonas ELLELVEMEVRELLSKYDFPGDDTPIVKGSAKLALEGDTGEL....GEVA [190] e_coli ELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALE..........GDAE [184] salmonella ELLELVEMEVRELLSQYDFPGDDTPIVRGSALKALE..........GDAE [184] shewanella ELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE..........GEPE [184] bacillus ELLELVEMEVRDLLSEYDFPGDDVPVVKGSALKALE..........GDAE [185] mycoplasma_genit EVQELVAEEVRDLLTSYGFDGKNTPIIYGSALKALE..........GDPK [184] streptococcus ELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALE..........GDSK [187] micrococcus ELLERVEMEVRQLLSSRSFDVDEAPVIRTSALKALE..........GDPQ [186] mycobacterium ELLELVEMEVRELLAAQEFDED.APVVRVSALKALE..........GDAK [185] gloeobacter ELLELVELEVRE.LSKYDFPGDDVPIVAGSALMALEKMASEPKLIRGKDD [196] prochlorothrix ELLELVELEVRELLTEYGFDGDSIPIVAGSALQAVDAMIAKGTTKQSENE [197] phormidium ELLELVELEVRELLSSYDFPGDDIPIVAGSALKAVEALQANSSIGKGEDE [197] spirulina ELLELVELEVRELLSSYDFPGDDIPIVSGSALKALDFLTENPKTTRGEND [194] anacystis ELLELVELEVRELLSSYDFPGDDIPIVAGSALQALEAIQGGASGQKGDNP [194] gloeothece ELLELVELEVRELLSIYDFPGDDIPIVIGSALKAVEALTATPTTKKGDNE [197] plectonema ELLELVELEIRELLSSYDFPGDDIPVTAGSALKAVEQLLSDPNTARGSDE [197] cyanophora DLLELVELEVRELLSKYDFPGDQIPFVSGSALLALESLSSNPKLMRGEDK [194] porphyridium EILELVELEVRELLSKYEFPGDDIPLAAGSALLALEAMLANPKTVRGQNE [197] smithora ELLELVELEGRELLSQYDFPGDDIPFVAGSALLALEAVTKNPNIKQGEDK [197] porphyra ELLELVELEGRELLSQYDFPGDDIPFVAGSALLALEAVTKNTSIKKGEDK [194] gracilaria ELLELVELEVRELLGQYGFPGDNIPFVAGSALRALENITQNNTIQRGENE [197] vaucheria ELLELVELEVRELLSNYDFPGDTIAICPGSALQALNAIALNPSLKQGEDK [197] costaria ELVELVELEVRELLSNYDFPGDDIPILTGSALQALDAINNEPTLKKGDNK [197] laminaria ELVELVELEVRELLSKYEFPGDDIPIRTGSALQALDAINNEPPFKKGDNK [197] odontella ELLELVELEVRELLSAYDFPGDDIDICPGSALQSVEAISSNPAIKRGDNP [197] coscinodiscus ELLELVELEVRELLSSYDFR.DDIPICPGSALQAIEAISANPAIKKGDNP [197] cyclotella ELLELVELEVRELLSTYDFPGDDIPICPGSRLQAIEAISSNPTLKRGDNP [194] ochromonas EIISLVELELRDLLQSYDYPGDEIPFVAGSALLALEAVTANPKIKKGENK [197] cryptomonas ELLELVQLEVQELLEKYDFPGSEIPFVAGSALLALEAVANNPTIKRGEDK [193] euglena ELLELVELEIRETLSNYEFPG.DIPVIPGSALLSVEALTKNPKITKGENK [193] astasia ELLELIELEIRETLNNYEFPGDEIPIITGSALLAIEALNKNPKIIKGENK [193] mantoniella ELLELVELEVRDTLSSYEFPGDDIPVVPGSALLALEALTEKPAMSAGENK [197] pandorina ELLELVELEVRELLDKYEFPGDEIPVVPGTALLALEALIANPKTQRGENK [197] chlamydomoas ELLELVELEVRETLDKYEFPGDEIPVVPGSALLALEALIENPKTQRGENK [194] gonium ELLELVELEVRETLDKYEFPGDEIPVIPGSALLALEALIENPKTQRGENP [197] draparnaldia ELLELVELEVRDILDKYGFASDEVQILSGSALLALEALVENPNIKPGDSE [197] chlorella ELLELVELEIRETLDKYEFPGDEIPIIAGSRLLALEALSQNPQTQPGDNK [197] codium ELLELVELEIQETLTTYEYPGEEIPIITGSALLALESLTAKYVL.RIGNK [193] derbesia ELLELVELEVQETLSEYEYPGEEIPIISGSALLALEALTENPELDSANNE [197] bryopsis ELLELVELEVRETLNEYEFPGDDIPIISGSALLALEALTENPDTNRTGDP [197] raphidonema ELLELVELEVRETLDNYEFPGDEIPIVAGSALLALEALTENPELKRGENK [197] coleochaete EVLPMLIQNMRQILIYYGFPGHTSPILCGSALLALEAMNENPNFNRGKNK [194] chara EILQLVDLEVRESLINYEFPGDKVPVVSGSALMALQALTEKPNTSRGENK [194] nitella EILQLVELEVRDYLNNYEFPGDE.PVICGSALMALQALTEKPNLLRGQNA [196] arabidopsis ELLELVELEVRELLSSYEFNGDDIPIISGSALLAVETLTENPKVKRGDNK [194] nicotiana_tabac ELLQLVELEVRELLSSYEFPGDDIPIISGSALLALEALMANPSIKRGENQ [194] nicotiana_syl_a ELLQLVELEVRELLSSYEFPGDDIPIISGSALLALEALMANPSIKRGENQ [194] glycine ELLQLVEIEVRDLLSSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNE [194] [ 210 220 230 240 250] [ . . . . .] thermotoga .YKPIQELLDAMDNYIPDPQRDVDKPFLMPI.EDVFSITGRGTVVTGRIE [237] ChlamydiaB .....AGDAAYVDDNIPTPEREIDKPFLMPI.EDVFSISGRGTVVTGRIE [233] thermus_th WVDKIWELLDAIDEYIPTPVRDVDKPFLMPV.EDVFTITGRGTVATGRIE [244] thermus_aq WVDKIWELLDAIDEYIPTPVRDVDKPFLMPV.EDVFTITGRGTVATGRIE [244] deinonema WVDRIWELLDAVDSYIPTPERATDKTFLMPV.EDVFTITGRGTVATGRVE [244] flexistipes .TKCIWELLQAMDDYIPAPERDIDKPFLMPI.EDVFSISGRGTVVTGRVE [235] borrelia_b .TKCVKELLESMDNYFDLPERDIDKPFLLAV.EDVFSISGRGTVATGRIE [234] bacteroides WEDKVMELMEAVDTWIPLPPRDVDKPFLMPV.EDVFSITGRGTVATGRIE [233] pseudomonas ....IMSLADALDTYIPTPERAVDGAFLMPV.EDVFSISGRGTVVTGRVE [235] e_coli WEAKILELAGFLDSYIPEPERAIDKPFLLPI.EDVFSISGRGTVVTGRVE [233] salmonella WEAKIIELAGFLDSYIPEPERAIDKPFLLPI.EDVFSISGRGTVVTGRVE [233] shewanella WEAKILELAAALDSYIPEPQRDIDKPFLLPI.EDVFSISGRGTVVTGRVE [233] bacillus WEAKIFELMDAVDEYIPTPERDTEKPFMMPV.EDVFSITGRGTVATGRVE [234] mycoplasma_genit WEAKIHDLIKAVDEWIPTPTREVDKPFLLAI.EDTMTITGRGTVVTGRVE [233] streptococcus YEDIIMELMNTVDEYIPEPERDTEKPLLLPV.EDVFSITGRGTVASGRID [236] micrococcus WVKSVEDLMDAVDEYIPDPVRDKDKPFLMPI.EDVFTITGRGTVVTGRAE [235] mycobacterium WVASVEELMNAVDESIPDPVRETDKPFLMPV.EDVFTITGRGTVVTGRVE [234] gloeobacter WVDCIYSLMDAVDAYIPTPERAIDKPFLMAV.EDLL.VSRRGTVAT.RIE [243] prochlorothrix WVDKIHKLMAEVDAFIPTPERIIDKPFLMAI.EDVFSITGRGTVATGRIE [246] phormidium WVDKIHDLVAQVDEYIPAPERDIDKPFLMAV.EDVFSITGRGTVATGRIE [246] spirulina WVDKIHALMDEVDAYIPTPERDIDKGLLDGLWEDVFSITGRGTVSTAGIE [244] anacystis WVDKILKLMEEVDAYIPTPEREVDRPFLMAV.EDVFTITGRGTVATGRIE [243] gloeothece WVDKILKLMDEVDEYIPTPEREIDKPFLMAV.EDVFSITGRGTVATGRIE [246] plectonema WVDKIHALMDDGDKYIPTPSVKVDKPFLMAV.EDVFSITGRGTVATGRIE [246] cyanophora WVDKILALMDAVDEYIPTPERPIDKSFLMAI.EDVFSITGRGTVATGRIE [243] porphyridium WVDKIYTLMDHVDSYIPAPERDVDKPFLMAV.EDVFSITGRGTVATGRIE [246] smithora WVDKISSLMEAVDTYIPTPERDIDKTFLMAV.EDVFSITGRGTVATGRIE [246] porphyra WVDKIFSLMEAVDTYIPTPERDVDKTFLMAV.EDVFSITGRGTVATGRIE [243] gracilaria WVDKIHSLMDAVDEYIPTPVRDVEKTFLMAV.EDVFSITGRGTVTTGRIE [246] vaucheria WVDKIFDLMTDVDTNIPTPVRDVDKAVLMAV.EDVFSITGRGTVATGRIE [246] costaria WVDKIYSLMESVDSYIPTPIRDVDKPFLMAI.EDVFSITGRGTVATGKID [246] laminaria WVDKIYTLMDSVDSYIPTPIRDVDKPFLMAI.EDVFSITGRGAVATGKID [246] odontella WVDKIFALMDAVDEYIPTPERDIEKTFLMAI.EDVFSITGRGTVATGRIE [246] coscinodiscus WVDKIFALMEAVDEYIPTPERDVEKTFLMAI.EDVFAITGRGTVATGRIE [246] cyclotella WVDKIYALMDAVDAYIPTPERDVEKTFLMAI.EDVFSITGRGTVATGRIE [243] ochromonas WVDKIFELMDAVDNYIPTPEREVDKPFLMAI.EDVFSITGRGTVATGRIE [246] cryptomonas WVDTIYQLMDKVDEYIPTPERETDKAFLMAV.EDVFSITGRGTVATGRIE [242] euglena WVDKILNLMDQVDSYIPTPTRDTEKDFLMAI.EDVLSITGRGTVATGRVE [242] astasia WVDKILDLMDKIDSYIPTPIRDTDKDFLLAI.EDVLSITGRGTVATGRIE [242] mantoniella WVDKIFALMDAVDSYIPTPERDTAKTFLMAI.EDVFSITGRGTVATGRVE [246] pandorina WVDKIYELMDKVDSYIPTPERETDKPFLLAV.EDVLSITGRGTVATGRVE [246] chlamydomoas WVDKIYQLMDNVDSYIPTPQRETDKPFLLAV.EDVLSITGRGTVATGRVE [243] gonium WVDKIYQLMDKVDSYIPTPQRETDKPFLLAV.EDVLSITGRGTVATGRVE [246] draparnaldia WVDKIYNLMATVDEHIPTPKREMDKPFLLAV.EDVFSITGRGTVATGRVE [246] chlorella WVDKIYNLMDQVDSYIPTPERETEKPFLMAI.EDVFSITGRGTVATGRVE [246] codium WVQKIYDLMETVDEYIPLPKRDTEKPFLMAI.ENVVSITGRGTVATGRVE [242] derbesia WVQKIYHFMDSVDDYIPLPERDTDKPFLMAI.EDVFSITGRGTVATGRVE [246] bryopsis WVKKIYDLMNEVDNYIPLPTRDTDKPFLMAI.ENVVSITGRGTVTTGRVE [246] raphidonema WVDKIFDLMDQVDTYIPTPERDMDKAFLMAV.EDVFSITGRGTVATGRVE [246] coleochaete WVDKISSLIDHLDLYLPTPRRKLNKPFLMPI.ERVILIPSFGLVGTGTIE [243] chara WVDKIYELMDAVDSYIPTPKRDIEKPFLMPI.EDVFSIQGRGTVATGRIE [243] nitella WVDKIYNLMDNVDSYIPTPKRDVEKPFLMPV.EDVFSIQGRGAVATGRIE [245] arabidopsis WVDKIYELMDAVDDYIPIPQRQTELPFLLAV.EDVFSITGRGTVATGRVE [243] nicotiana_tabac WVDKIYELMDAVDSYIPIPVRQTELPFLMAI.EDVFSITGRGTVATGRVE [243] nicotiana_syl_a WVDKIYELMDAVDSYIPIPVRQTELPFLMAI.EDVFSITGRGTVATGRVE [243] glycine WVDKIFQLMDEVDNYIPIPQRQTDLPFLLAV.EDVFSITGRGTVATGRVE [243] [ 260 270 280 290 300] [ . . . . .] thermotoga RGRIRPGDEVEIIGLSYEIKKTVVTSVEMFRKELDEGIAGDNVGCLLRGI [287] ChlamydiaB RGIVKVSDKVQLVGLRDT.KETLLLGLEMFRKNSQKVRAGENVGLLLRGI [282] thermus_th RGKVKVGDEVEIVGLAPETRRTVVTGVEMHRKTLQEGIAGDNVGVLLRGV [294] thermus_aq RGKVKVGDEVEIVGLAPETRKTVVTGVEMHRKTLQEGIAGDNVGLLLRGV [294] deinonema RGVVKVQDEVEIIGLRDT.KKTTVTGIEMHRKLLDSGMAGDNVGVLLRGV [293] flexistipes RGKVRVQDEIEIVGLTDT.RKTVVTGVEMFRKILDEGEAGDNVGVLLRGI [284] borrelia_b RGIIKVGQEVEIVGIKET.RKTTVTGVEMFQKILEQGQAGDNVGLLLRGV [283] bacteroides TGVIHVGDEIEILGLGED.KKSVVTGVEMFRKLLDQGEAGDNVGLLLRGV [282] pseudomonas RGIVKVGEEIEIVGIKPT.VKTTCTGVEMFRKLLDQGQAGDNVGILLRGT [284] e_coli RGIIKVGEEVEIVGIKET.QKSTCTGVEMFRKLLDEGRAGENVGVLLRGI [282] salmonella RGIIKVGEEVEIVGIKET.QKSTCTGVEMFRKLLDEGRAGENVGVLLRGI [282] shewanella RGIVRVGDEVEIVGVRAT.TKTTCTGVEMFRKLLDEGRAGENCGILLRGT [282] bacillus RGQVKVGDEVEIIGLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGV [284] mycoplasma_genit RGELKVGQEVEIVGLKPI.RKAVVTGIEMFKKELDSAMAGDNAGVLLRGV [282] streptococcus RGTVRVNDEIEIVGIKEETQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGV [286] micrococcus RGTLKINSEVEIVGIRDV.QKTTVTGIEMFHKQLDEAWAGENCGLLVRGL [284] mycobacterium RGVINVNEEVEIVGIRPSTTKTTVTGVEMFRKLLDQGQAGDNVGLLLRGV [284] gloeobacter RGKVKVGETIELVGIR.T.RST.VTGLEMFQ.SLDEGLAGDNIGVLLRGI [289] prochlorothrix RGKVKVGE.IEIVGIRDN.RQSIVTGVEMFRKLLDEGMAGDNVGVLLRGI [294] phormidium RGKVKVGEQIEIVGIRDT.TQSTVTGVEMFQKTLDEGMAGDNVGVLLRGI [295] spirulina RGKVKVGDTVELIGIKDT.RTTTVTGAEMFQKTLEEGMAGDNVGLLLRGI [293] anacystis RGSVKVGETIEIVGLRDT.RSTTVTGVEMFQKTLDEGLAGDNVGLLLRGI [292] gloeothece RGKIKVGETVELVGIRNT.RSTTVTGVEMFQKVLEEGMAGDNVGLLLRGI [295] plectonema RGLVKVGETVQLVGIADT.RETTVTGVEMFQKTLDSGMAGDNVGVLLRGV [295] cyanophora RGAIKVGETVELVGLKDT.KSTTVTGLEMFQKTLEEGMAGDMIGILLRGV [292] porphyridium SGIIKVGDTIEIVGLRET.RTTTITGLEMFQKTLEEGIAGDNIGILLRGI [295] smithora RGIIKVGDTIEIVGLRET.RTTTITGLEMFQKTLEEGLAGDNIGILLRGV [295] porphyra RGIIKVGDTIEIVGLRET.RTTTITGLEMFQKTLEEGLAGDNIGILLRGV [292] gracilaria RGIIKVGDTIEIVGLRET.TTTTITGLEMFQKTLDEGMAGDNIGILLRGV [295] vaucheria RGVVKVGETIQIIGIQDT.RSTTVTGVEMFQKTLDEGLAGDNVGILLRGV [295] costaria RGIVKVGETVDLVGLGDT.KSTTVTGVEMFQKTLDEGVAGDNVGILLRGL [295] laminaria RGIVKVGENVDLVGLGDT.KSTTVTGVEMFQKTLDEGVAGDNVGILLRGL [295] odontella RGVVKVGDTVEIVGVGDT.RTTTITGTEMFQKTLDEGFAGDNVGILLRGV [295] coscinodiscus RGIIKVGDTVEIVGISET.KTTTITGLKMFQKTLEEGFAGDNVGILLRGV [295] cyclotella RGVIKVGDNVEIVGIGDT.KTTTITGIEMFQKTLEEGFAGDNVGILLRGV [292] ochromonas RGTILLGDTVELVGLGDT.KTTTVTGLEMFQKTLDKGMAGDNIGILLRGI [295] cryptomonas RGKVKVGDTIEIVGLRET.RNTTITGLEMFQKSLDEALAGDNVGILVRGI [291] euglena RGTIKVGETVELVGLKDT.RSTTITGLEMFQKSLDEALAGDNVGVLLRGI [291] astasia RGKIKVGETVELIGLKNI.KSTTITGLEMFQKSLDEAIAGDNVGVLLRGI [291] mantoniella RGTVNCGDVVEIVGLGDT.REVTVTGLEMFQKHLDESVAGDKVGVLLRGI [295] pandorina RGTLKISDNVEIVGLKPT.QTAVVTGLEMFQKTLDETIAGDNVGVLLRGV [295] chlamydomoas RGALRISDNVEIVGLRPT.QTAVVTGLEMFKKTLDETLAGDNVGVLLRGV [292] gonium RGTLKISDTVEFVGLKPT.QSAVVTGLEMFKKTLDETLAGDNVGVLLRGV [295] draparnaldia RN.IKINETVEIIGLRRNTKTTTVTAIEMFQKTLDETIAGDNVGILLRGV [295] chlorella RGCVKIGDTVELVGLRDT.KTTTVTGLEMFQKTLDESVAGDNVGILLRGV [295] codium RGMIEVGQTVELVGLKNT.KEAIITGLEMFHKTLEKSVAGDNVGILLRRI [291] derbesia RGSVDVGENVELVGLKET.KETIITGLEMFQKTLDKSVAGDNVGILLRGI [295] bryopsis RGADQVGDNIEIVGVKET.RQATITGLEMFQKTLEKSVAGDNVGVLLRGI [295] raphidonema RGSGKVGESIEIVGLRDT.RTTTVTGLEMFQKTLEESVAGDNVGVLLRGI [295] coleochaete KGHINIGESVEIVGFKDT.QHSKVISLKMFNKTLEQAIAGDDIGIFLEGT [292] chara RGILKLGDIVELIGLNEKIRSTVVTGLEMFRRLLEQGFAGENIGVLLRGI [293] nitella RGVIKLGDSIELVGLKEETRSTVVTGLEMFRRLLEQSFAGENIGVLLRGI [295] arabidopsis RGTVKVGETVDLVGLRET.RSYTVTGVEMFQKILDEALAGDNVGLLLRGI [292] nicotiana_tabac RGTVRIGDTVDIVGLKDT.RSTTVTGVEMFQKILDEAMAGDNVGLLLRGI [292] nicotiana_syl_a RGTVRIGDTVDIVGLKDT.RSTTVTGVEMFQKILDEAMAGDNVGLLLRGI [292] glycine RGTIKVGETVDLVGLRET.RNTTVTGVEMFQKILDEALAGDNVGLLLRGV [292] [ 310 320 330 340 350] [ . . . . .] thermotoga DKDEVERGQVLAAPGSIKPHKRFKAQIYVLKKEEGGRHTPFTKGYKPQFY [337] ChlamydiaB GKNDVERGMVVCLPNSVKPHTRFKCAVYVLQKEEGGRHKPFFTGYRPQFF [332] thermus_th SREEVERGQVLAKPGSITPHTKFEASVYVLKKEEGGRHTGFFSGYRPQFY [344] thermus_aq SREEVERGQVLAKPGSITPHTKFEASVYILKKEEGGRHTGFFTGYRPQFY [344] deinonema ARDDVERGQVLAKPGSIKPHTKFEASVYVLSKDEGGRHSAFFGGYRPQFY [343] flexistipes KKDDVERGQVLAKPGSITPHRKFKCEAYILTKEEGGRHTPFFSGYRPQFY [334] borrelia_b DKKDIERGQVLSAPGTITPHKKFKASIYCLTKEEGGRHKPFFPGYRPQFF [333] bacteroides DKNEIKRGMVLCKPGQIKPHSKFKAEVYILKKEEGGRHTPFHNKYRPQFY [332] pseudomonas KREDVERGQVLAKPGSITPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFY [334] e_coli KREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFY [332] salmonella KREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFY [332] shewanella KRDDVERGQVLAKPGSINPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFY [332] bacillus SREEIQRGQVLAKPGTITPHSKFKAEVYVLSKEEGGRHTPFFSNYRPQFY [334] mycoplasma_genit ERKEVERGQVLAKPGSIKPHKKFKAEIYALKKEEGGRHTGFLNGYRPQFY [332] streptococcus QRDEIERGQVIAKPGSINPHTKFKGEVYILTKEEGGRHTPFFNNYRPQFY [336] micrococcus KRDDVERGQVLVEPGSITPHTNFEANVYILSKDEGGRHTPFYSNYRAQFY [334] mycobacterium KREDVERGQVVTKPGTTTPHTEFEGQVYILSKDEGGRHTPFFNNYRPQFY [334] gloeobacter KKEDVERGMVLAKPGSITPHTQFEGEVYILSKXXXXXXXXXXXXXXXXXX [339] prochlorothrix QREDLERGMVLAKSRSITPHTKFESEVYVLKKXXXXXXXXXXXXXXXXXX [344] phormidium QKEDILRGMVLAKPGSITPHTKFEAEVYVLIGXXXXXXXXXXXXXXXXXX [345] spirulina QKNDVQRGMVIAKPKSITPHTKFEAEVYILKKEEGGRHTPFFKGYRPQFY [343] anacystis QKTDIERGMVLAKPGSTTPHTKFESEVYVLKKDEGGRHTPFFPGYRPQFY [342] gloeothece QKEDIERGMVIAKPGSITPHTQFEGEVYVLTKXXXXXXXXXXXXXXXXXX [345] plectonema QKEDIERGMVLAKSGSITPHTEFESEVYVLNKXXXXXXXXXXXXXXXXXX [345] cyanophora QKTDIERGMVLAKPGSITPHTQFESEVYVLTKDEGGRHTPFFSGYRPQFY [342] porphyridium QKKDIERGMVLAKPGSIKPHNQFEAEVYILSKXXXXXXXXXXXXXXXXXX [345] smithora QKKDIERGMVLAKPGTITPHTQFEAEVYILTKXXXXXXXXXXXXXXXXXX [345] porphyra QKKDIERGMVLAKPGTITPHTQFEAEVYILTKEEGGRYTPFFPGYRPQFY [342] gracilaria QKKDIERGMVLAQPGTITPHTQFEAEVYVLTKXXXXXXXXXXXXXXXXXX [345] vaucheria QKDDIQRGMVLAKPGTITPHKGFEGEVYILTKXXXXXXXXXXXXXXXXXX [345] costaria QKGDIERGMVLAKPGTITPHKGFEGEVYILTKXXXXXXXXXXXXXXXXXX [345] laminaria QKDEIERGMVLSKPGTITPHNTSESELYILTKXXXXXXXXXXXXXXXXXX [345] odontella TREDIERGMVLSEPGTITPHTNFESEVYVLTKXXXXXXXXXXXXXXXXXX [345] coscinodiscus TREEIERGMVLAQPGTTTPHTNFESEVYVLTKXXXXXXXXXXXXXXXXXX [345] cyclotella TRENIERGMVLAKPGTITPHTNFESEVYVLTKEEGGRHTPFFTGYSPIFY [342] ochromonas QKTDVLRGMVLSKPGSIKPHTKFEAEVYILTKXXXXXXXXXXXXXXXXXX [345] cryptomonas QKTDIERGMVLAAPGSITPHTKFEGEVYVLTKEEGGRHTPFFSGYRPQFY [341] euglena QKNDVERGMVLAKPRTINPHTKFDSQVYILTKEEGGRHTPFFEGYRPQFY [341] astasia QKNEVERGMVIAKPGTIQPHIKFNSQVYILTKEEGGRHTPFFEGYKPQFY [341] mantoniella QKDDIERGMVLAKKGTITPHTKFESQVYVLSKXXXXXXXXXXXXXXXXXX [345] pandorina QKKDIERGMVIAKPGTITPHTKFEAQVYVLTKXXXXXXXXXXXXXXXXXX [345] chlamydomoas QKKDIERGMVIAKPGTTTPHTKFEAQVYVLTKEEGGRHSAFMIGYQPQFY [342] gonium QKKDIERGMVIAKPGTITPHTKFEAQVYVLTKXXXXXXXXXXXXXXXXXX [345] draparnaldia QKKDIERGMVIAKPGTIMPHTLFESQVYVLTAXXXXXXXXXXXXXXXXXX [345] chlorella QKIDIERGMVLAKPGSIKPHTKFEAQVYLFNKXXXXXXXXXXXXXXXXXX [345] codium QKEEIQRGMVLAKPSSILPHQHFKAQVYILKKEEGGRHTSFFAGYRPQFY [341] derbesia QKEEIQRGMVLAKPGSITPHRCFKAQVYILKKXXXXXXXXXXXXXXXXXX [345] bryopsis QKEEVEPGMVLAKPGSTTPHKQFEAQVYILKKXXXXXXXXXXXXXXXXXX [345] raphidonema QKIDIERGMVLAKPGTITPHTKFESQVYVLTKXXXXXXXXXXXXXXXXXX [345] coleochaete NKNNFQKGMVIAKPNTIQSWNHFEAQIYILRREEGGRRSPFFQGYCPQFY [342] chara EKKDIERGMVIAQPGTIEPHTRFEAQVYILRKEEGGRHSPFFAGYRPQFF [343] nitella EKKDIERGMVIAQPGTTKPHTRFEAQVYILGKXXXXXXXXXXXXXXXXXX [345] arabidopsis QKADIQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFY [342] nicotiana_tabac QKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFY [342] nicotiana_syl_a QKIDIQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFY [342] glycine QKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFY [342] [ 360 370 380 390 400] [ . . . . .] thermotoga IRTADVTGEIVGLPEGVE..............MVMPGDHVEMEIELIYPV [373] ChlamydiaB FLTTDVTGVV.TLPEGVE..............MVMPGDNVEFEVQLISPV [367] thermus_th FRTTDVTGVV.QLPPGVE..............MVMPGDNVTFTVELIKPV [379] thermus_aq FRTTDVTGVV.RLPQGVE..............MVMPGDNVTFTVELIKPV [379] deinonema FRTTDVTGVV.ELPEGVE..............MVMPGDNITFVVELIKPI [378] flexistipes FRTTDVTGVI.TLAEGVE..............MVMPGDNISCDVDLIQPI [369] borrelia_b FRTTDVTGVV.AL.EGKE..............MVMPGDNVDIIVELISSI [367] bacteroides LRTMDCTGEI.TLPEGTE..............MVMPGDNVTITVELIYPV [367] pseudomonas FRTTDVTGSI.ELPKDKE..............MVMPGDNVSITVKLIAPI [369] e_coli FRTTDVTGTI.ELPEGVE..............MVMPGDNIKMVVTLIHPI [367] salmonella FRTTDVTGTI.ELPEGVE..............MVMPGDNIKMVVTLIHPI [367] shewanella FRTTDVTGTI.ELPEGVE..............MVMPGDNIKMVVTLICPI [367] bacillus FRTTDVTGII.HLPEGVE..............MVMPGDNTEMNVELISTI [369] mycoplasma_genit FRTTDVTGSI.ALAENTE..............MVLPGDNASITVELIAPI [367] streptococcus FRTTDVTGSI.ELPAGTE..............MVMPGDNVTIDVELIHPI [371] micrococcus FRTTDVTGVI.TLPEGTE..............MVMPGDTTEMSVELIQPI [369] mycobacterium FRTTDVTGVV.TLPEGTE..............MVMPGDNTNISVKLIQPV [369] gloeobacter XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [389] prochlorothrix XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [394] phormidium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] spirulina VRTTDVTGTI.DEFTADDGSTPE.........MVIPGDRINMTVQLICPI [383] anacystis VRTTDVTGAI.SDFTADDGSAAE.........MVIPGDRIKMTVELINPI [382] gloeothece XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] plectonema XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] cyanophora VRTTDVTGSI.DAFTADDGSNAE.........MVMPGDRIKMTVSLVHPI [382] porphyridium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] smithora XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] porphyra VRTTDVTGTI.NQFTADDGTDAE.........MVMPGDRIKMTAELINAI [382] gracilaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] vaucheria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] costaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] laminaria XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] odontella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] coscinodiscus XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] cyclotella VITTDVTGSI.DQFTADDGSIVE.........MVMPGDRIKMTAELIYPV [382] ochromonas XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] cryptomonas VRTTDVTGTI.AQFTSDDGSTAE.........MVMPGDRIKMTAQLIHPI [381] euglena VRTTDVTGKI.ESFRSDNDNPAQ.........MVMPGDRIKMKVELIQPI [381] astasia VRTTDVTGKI.ESFKSDDGTTVQ.........MVMPGDKIKMIVELVQPI [381] mantoniella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] pandorina XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] chlamydomoas VRTTDVTGKV.VGFNHIQMRNPSSVAEEHSNKMAMPGDRISMTVELINPI [391] gonium XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] draparnaldia XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] chlorella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] codium VRTTDVTGHI.KTFQGKIDNTQIQ........MVMPGDRIQMEVELIRPI [382] derbesia XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] bryopsis XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] raphidonema XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] coleochaete FRTIQITGRM.ESFEYEIGGKTW.........MVMPGEKIKAIIQLIFPI [382] chara VRTADVTGVI.EAFEYDNGDKTR.........MVMPGDRVKMIVNLICPI [383] nitella XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [395] arabidopsis MRTTDVTGKV.TKIMNDKDEESK.........MVMPGDRVKIVVELIVPV [382] nicotiana_tabac MRTTDVTGKV.TSITTDKGEESK.........MVMPGDRVNLVVELIMPV [382] nicotiana_syl_a MRTTDVTGKV.TSITTDKGEESK.........MVMPGDRVNLVVELIMPV [382] glycine MRTTDVTGKV.TSIMNDKDEEST.........MVLPGDRVKMVVELIVPV [382] [ 410 420 ] [ . . ] thermotoga AIEKGQRFAVREGGRTVGAGVVTEVIE [400] ChlamydiaB ALEEGMRFAIREGGRTIGAGTISKIIA [394] thermus_th GLEEGLRFAIREGGRTVGAGVVTKILX [406] thermus_aq ALEEGLRFAIREGGRTVGAGVVTKILE [406] deinonema AMEEGLRFAIREGGRTVGAGVVAKVLE [405] flexistipes AMEQGLRFAIREGGRTVGAGVVTEIVE [396] borrelia_b AMDKNVEFAVREGGRTVASGRILEILE [394] bacteroides ALNIGLRFAIREGGRTVGAGQITEIID [394] pseudomonas AMEEGLRFAIREGGRTVGAGVVAKILD [396] e_coli AMDDGLRFAIREGGRTVGAGVVAKVLG [394] salmonella AMDDGLRFAIREGGRTVGAGVVAKVLG [394] shewanella AMDEGLRFAIREGGRTVGAGVVAKIIA [394] bacillus AIEEGTRFSIREGGRTVGSGVVSTITE [396] mycoplasma_genit ACEKGSKFSIREGGRTVGAGTVTEVLE [394] streptococcus AVEQGTTFSIREGGRTVGSGMVTEIEA [398] micrococcus AMEEGLGFAIREGGRTVGSGRVTKITK [396] mycobacterium AMDEGLRFAIREGGRTVGAGRVTKIIK [396] gloeobacter XXXXXXXXXXXXXXXXXXXXXXXXXXX [416] prochlorothrix XXXXXXXXXXXXXXXXXXXXXXXXXXX [421] phormidium XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] spirulina AIEQGMRFAIREGGRTVGAGVVAKILX [410] anacystis AIEQGMRFAIREGGRTIGAGVVSKILQ [409] gloeothece XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] plectonema XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] cyanophora AIEQGMRFRIREGGRTIGAGVVSKILK [409] porphyridium XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] smithora XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] porphyra AIEQGMLFAIREGGRTVGAGVVSKILK [409] gracilaria XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] vaucheria XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] costaria XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] laminaria XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] odontella XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] coscinodiscus XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] cyclotella AIEEGMRFVIREGGRTIGAGVVSKIVK [409] ochromonas XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] cryptomonas AIEKGMRFAIREGGRTVGAGVVSKIIE [408] euglena AIEKGMRFAIREGGRTVGAGVVLSIXX [408] astasia AIEKGMRFAIREGGKTVGAGVIINIID [408] mantoniella XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] pandorina XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] chlamydomoas AIEKGMRFAIREGGRTVGAGVVTNIVQ [418] gonium XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] draparnaldia XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] chlorella XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] codium AIETRMRFAIREGGKTVGAGVVTTIVQ [409] derbesia XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] bryopsis XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] raphidonema XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] coleochaete ALKKKMRFVIREGGFTIGVGIILELIK [409] chara AIEKKMRFAIREGGRTIGAGVVYKYXX [410] nitella XXXXXXXXXXXXXXXXXXXXXXXXXXX [422] arabidopsis ACEQGMRFAIREGGKTVGAGVIGTILE [409] nicotiana_tabac ACEQGMRFAIREGGKTVGAGVIQKIIE [409] nicotiana_syl_a ACEQGMXXXXXXXXXXXXXXXXXXXXX [409] glycine ACEQGMRFAIREGGKTVGAGVIQSIIX [409] ; END; BEGIN CODONS; GENCODE OTHERCODE K N K N T T T T R S R S I I M I Q H Q H P P P P * * * * T T T T E D E D A A A A G G G G V V V V * Y * Y S S S S W C W C L F L F S S * * ; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; END; BEGIN MACCLADE; v 3.0 -1410051918 1000&/0 0 0 END;