#NEXUS BEGIN DATA; DIMENSIONS NTAX=57 NCHAR=532; FORMAT MISSING=X GAP=- DATATYPE=PROTEIN SYMBOLS = " 1 2 3 4" ; [!rbcL alignment from Delwiche and Palmer (1996) Mol. Biol. Evol. (In press)] MATRIX [ 10 20 30 40 50] [ . . . . .] RHODOSPIRILLUM_II M---------------------------DQSSRYVNLALKEEDLIAGGEH [23] RHODOBACTER_II M---------------------------DQSNRYARLD--QEALIAGGRH [21] Rhodobacter_cap_II M---------------------------DQSNRYARLDLKEADLIAGGRH [23] hydrogenovibrioII M---------------------------DQSNRYADLTLTEEKLVADGNH [23] thiobacil_denit_II M---------------------------DQSARYADLSLKEEDLIKGGRH [23] Gonyaulax_II XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [50] XANTHOBACTER M-----GADAAIGQIKDAKKRYAAGVLKYAQMGYWDGDYQ-----PKDTD [40] RHODOBACTER_1 M--------DTKTTEIKGKERYKAGVLKYAQMGYWDGDYV-----PKDTD [37] ALCALIGENES_c_ATCC M-------NAPETIQAKPRKRYDAGVMKYKEMGYWDGDYV-----PKDTD [38] alcaligenes_c_H16 M-------NAPESVQAKPRKRYDAGVMKYKEMGYWDGDYE-----PKDTD [38] alcaligenes_p_H16 M-------NAPESVQAKPRKRYDAGVMKYKEMGYWDGDYE-----PKDTD [38] CRYPTOMONAS M------SQSVESRTRIKNERYESGVIPYAKMGYWDADYV-----IKDTD [39] CYANIDIUM M-SQSLEEKSVQERTRIKNSRYESGVIPYAKMGYWNPDYQ-----VKDTD [44] ANTITHAMNION M------SNSVEERTRIKNERYESGVIPYAKMGYWDPEYA-----VKDTD [39] PORPHYRIDIUM M------DQSVQERTRIKNERYESGVIPYAKMGYWDPDYA-----IKATD [39] ahnfeltia X-XXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXX [43] ECTOCARPUS M------PEDVQNRTRIKSERYESGVIPYAKMGYWDADYK-----LKDTD [39] PYLAIELLA M------PEDVQNRTRIKSERYESGVIPYAKMGYWDADYN-----VKDTD [39] OLISTHODISCUS M------SNNVYERNRIKNDRYESGVIPYAKMGYWDANYS-----VKDTD [39] CYLINDROTHECA M------SQSVSERTRIKSDRYESGVIPYAKMGYWDASYA-----VKTTD [39] Mn_bacterium M--------DQGSQTIKGKDRYKSGVMEYRKMGYWEPDYE-----PKETD [37] hydrogenovibrioIa M-----------------A-KTYNAGVKEYRETYWMPEYE-----PKDSD [27] hydrogenovibrioIb M-----------------ASKTFDAGVQDYQLTYWTPDYT-----PLDTD [28] pseudomonas_hy M---------------SQPKRYEAGVKEYR-ETYWEPTYV-----PKDSD [29] thiobacil_ferr_fe1 M----------------AVKTYEAGVKDYR-QTYWAPEYV-----PLDSD [28] thiobacil_ferr_ATC M----------------AVKTYNAGVKDYR-NTYWEPDYS-----VKDTD [28] Thiobacil_denit_I M----------------AVKTYSAGVKEYR-QTYWMPEYT-----PLDTD [28] CHROMATIUM_A M-----------------AKTYSAGVKEYR-ETYWMPNYT-----PKDTD [27] CHROMATIUM_L M----------------STKTYDAGVKDYA-LTYWTPDYV-----PLDSD [28] ALVINO_symb M-----------------AKKYDAGVKDYR-ETYWMPDYT-----PKETD [27] nitrobacter M----------------AVKSYQAGVTQYR-QSYWQPDYM-----PLDTD [28] synechococcus M---------AYTQSKSQKVGYQAGVKDYR-LTYYTPDYT-----PKDTD [35] synechocystis M--------------VQAKAGFKAGVQDYR-LTYYTPDYT-----PKDTD [30] ANABAENA M--------SYAQTKTQTKSGYKAGVQDYR-LTYYTPDYT-----PKDTD [36] ANACYSTIS M------------PKTQSAAGYKAGVKDYK-LTYYTPDYT-----PKDTD [32] PROCHLOROTHRIX M-------------AVQTK-GYQAGVKDYR-LTYYTPEYT-----PKDTD [30] prochlorococcus XXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXX [44] prochloron XXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXXXX [44] CYANOPHORA M---------SSQARTQTRAGFKAGVKDYR-LTYYTPEYT-----PKETD [35] EUGLENA M---------SPQTETKTGAGFKAGVKDYR-LTYYTPDYQ-----VSETD [35] pyramimonas XXXXXXXXXXXXX-XXXXXXXFKAGVKDYR-LTYYTPDYQ-----VKETD [43] C.MOEWUSII M---------VPQTETKAGAGFKAGVKDYR-LTYYTPDYV-----VKDTD [35] CHLAMYDOMONAS M---------VPQTETKAGAGFKAGVKDYR-LTYYTPDYV-----VRDTD [35] CHLORELLA M---------SPQTETKARVGFKAGVKDYR-LTYYTPDYQ-----PKDTD [35] BRYOPSIS M---------APKTETKAGAGFKAGVKDYR-LTYYTPDYQ-----VKDTD [35] coleochaete M---------SPLTETKAGTGFKAGVKDYR-LTYYTPEYE-----TKDTD [35] LIVERWORT M---------SPQTETKAGVGFKAGVKDYR-LTYYTPDYE-----TKDTD [35] DOUGFIR M---------SPKTETKASVGFKAGVKDYR-LTYYTPEYQ-----TKDTD [35] N.ACUMINATA M---------SPQTETKASVGFKAGVKEYK-LTYYTPEYQ-----TKDTD [35] TOBACCO M---------SPQTETKASVGFKAGVKEYK-LTYYTPEYQ-----TKDTD [35] PETUNIA M---------SPQTETKASVGFKAGVKEYK-LTYYTPEYQ-----AKDTD [35] PEA M---------SPQTETKAKVGFKAGVKDYK-LTYYTPDYQ-----TKDTD [35] ALFALFA M---------SPQTETKATVGFKAGVKDYR-LTYYTPDYE-----TKDTD [35] BARLEY M---------SPQTETKAGVGFQAGVKDYK-LTYYTPEYE-----TKDTD [35] MAIZE M---------SPQTETKASVGFKAGVKDYK-LTYYTPEYE-----TKDTD [35] RICE M---------SPQTETKASVGFKAGVKDYK-LTYYTPEYE-----TKDTD [35] SPINACH M---------SPQTETKASVEFKAGVKDYK-LTYYTPEYE-----TLDTD [35] [ 60 70 80 90 100] [ . . . . .] RHODOSPIRILLUM_II VLCAYIMKPKAGYGYVATAAHFAAESSTGTNVEVCT-TDDFTRGVDALVY [72] RHODOBACTER_II VLCAYVMKPKAGYGYLETAAHFAAESSTGTNVEVST-TDDFTRGVDALVY [70] Rhodobacter_cap_II VLCAYIMKPKAGYGYLETAAHFAAESSTGTNVEVST-TDDFTRGVDALVY [72] hydrogenovibrioII LLVAYRLKPAAGYGFLEVAAHVAAESSTGTNVEVST-TVDFTRGVDALVY [72] thiobacil_denit_II ILVAYKMKPKSGYGYLEAAAHFAAESSTGTNVEVST-TDDFTKGVDALVY [72] Gonyaulax_II XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [100] XANTHOBACTER ILALFRVTPQDGVDPVEAAAAVAGESSTATWTVVWTDRLTAADMYRAKAY [90] RHODOBACTER_1 VLALFRITPQEGVDPVEAAAAVAGESSTATWTVVWTDRLTACDSYRAKAY [87] ALCALIGENES_c_ATCC VLALFRITPQDGVDPVEAAAAVAGESSTATWTVVWTDRLTACDMYRAKAY [88] alcaligenes_c_H16 LLALFRITPQDGVDPVEAAAAVAGESSTATWTVVWTDRLTACDM-SVQGL [87] alcaligenes_p_H16 LLALFRITPQDGVDPVEAAAAVAGESSTATWTVVWTDRLTACDMYRAKAY [88] CRYPTOMONAS VLAMFRMTPQKGVDPVECAAAIAGESSTATWTVVWTDLLTACDLYRAKAY [89] CYANIDIUM VLALFRVTPQPGVDPIEAAAAVAGESSTATWTVVWTDLLTAADLYRAKAY [94] ANTITHAMNION ILALFRVSPQPGVDPIEASAAVAGESSTATWTVVWTDLLTACDLYRAKAY [89] PORPHYRIDIUM VLALFRVTPQPGVDPVEAAAAIAGESSTATWTVVWTDLLTACDLYRAKAY [89] ahnfeltia XXXLFRVTPQPGVDPVEASAAIAGESSTATWTVVWTDLLTACDLYRAKAY [93] ECTOCARPUS ILALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDIYRAKAY [89] PYLAIELLA ILALFRITPQPGVDPVEARAAVAGESSTATWTVVWTDLLTACDIYRAKAY [89] OLISTHODISCUS LLALFRLTPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDVYRAKAY [89] CYLINDROTHECA VLALFRITPQPGVDPVEAAAAVAGESSTATWTVVWTDLLTACDRYRAKAY [89] Mn_bacterium VIACFRITPQDGVDPIEAAAAVAGESSTATWTVVWTDRLTAAEKYRAKAY [87] hydrogenovibrioIa FLACFKVVPQPGVPREEIAAAVAAESSTGTWTTVWTDLLTDLDYYKGRAY [77] hydrogenovibrioIb LLACFKVVPQEGVPREEAAAAVAAESSTGTWTTVWTDLLTDMEFFKGRAY [78] pseudomonas_hy FLAVFKIVPQPGVPREESAAAVAAESSTATWTTVWTDLLTDLYYYKGRAY [79] thiobacil_ferr_fe1 ILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAY [78] thiobacil_ferr_ATC ILAVFKITPQAGVDREEAPAAVAAESSTGTWTTVWTDLLTDLDYYKGRAY [78] Thiobacil_denit_I ILACFKITPQAGVDREEAAAAVAAESSTGTWTTVWTDLLTDLDYYKGRAY [78] CHROMATIUM_A ILACFKITPQAGVPREEAAAAVAAESSTGTWTTVWTDLLTDLDYYKGRAY [77] CHROMATIUM_L LLACFKVTPQAKVSREEAAAAVAAESSTGTWTTVWSDLLTDLDYYKGRAY [78] ALVINO_symb LLACFKIIPQPGVPREEARAAVAAESSTGTWTTVWTDLLTDLDHYKGRAY [77] nitrobacter ILACFKITPQPGVDREEAAAAVAAESSCGTWTTVWTDLLTDLDYYKGRAY [78] synechococcus ILAAFRVTPQPGVPFEEAAAAVAAESSTGTWTTVWTDLLTDLDRYKGRCY [85] synechocystis LLACFRMTPQPGVPAEEAAAAVAAESSTGTWTTVWTDNLTDLDRYKGRCY [80] ANABAENA ILAAFRVTPQPGVPFEEAAAAVAAESSTGTWTTVWTDLLTDLDRYKGRCY [86] ANACYSTIS LLAAFRFSPQPGVPADEAGAAIAAESSTGTWTTVWTDLLTDMDRYKGKCY [82] PROCHLOROTHRIX LLACFRMTPQPGVPPEEAGAAVAAESSTGTWTTVWTDLLTDLDRYKGRCY [80] prochlorococcus XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWSTVWSELLTDLEFYKGRCY [94] prochloron XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWTTVWTDGLTDLDRYKGRCY [94] CYANOPHORA ILAAFRMTPQPGVPPEECAAAVAAESSTGTWTTVWTDGLTSLDRYKGRSY [85] EUGLENA ILAAFRMTPQPGVPAEECGAAVAAESSTGTWTTVWTDGLTQLDRYKGRCY [85] pyramimonas ILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCY [93] C.MOEWUSII ILAAFRMTPQPGVPAEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] CHLAMYDOMONAS ILAAFRMTPQLGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] CHLORELLA ILAAFRMTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] BRYOPSIS ILAAFRMTPQPGVPPEECGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] coleochaete ILAAFRMTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] LIVERWORT ILAAFRMTPQPGVPAEEAGNAVAAESSTGTWTTVWTDGLTNLDRYKGRCY [85] DOUGFIR ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] N.ACUMINATA ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] TOBACCO ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] PETUNIA ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGHRY [85] PEA ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] ALFALFA ILAAFRVSPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] BARLEY ILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] MAIZE ILAAFRVTPQLGVPPEEAGAAVAAESSAGTWTTVWTDGLTSLDRYKGRCY [85] RICE ILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCY [85] SPINACH ILAAFRVSPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTNLDRYKGRCY [85] [ 110 120 130 140 150] [ . . . . .] RHODOSPIRILLUM_II EVDEA-----RELTKIAYPVALFHRNITDGKAMIASFLTLTMGNNQGMGD [117] RHODOBACTER_II EIDPE-----KEIMKIAYPVELFDRNIIDGRAMLCSFLTLTIGNNQGMGD [115] Rhodobacter_cap_II EIDPE-----KEIMKIAYPVELFDRNIIDGGAMLCSFLTLTIGNNQGMGD [117] hydrogenovibrioII EIDEAAFGDKGGLMKIAYPVDLFDPNLIDGHYNVSHMWSLILGTNHGMGD [122] thiobacil_denit_II YIDEA-----SEDMRVAYPLELFDRNVTDGRFMLVSFLTLAIGNNQGMGD [117] Gonyaulax_II XXXXXXXXXXXXXXXIAYPVPLFDRXXXXXXXXXGAFLTFGTSNNQGMGD [150] XANTHOBACTER KVEPVPGQPGQYFCWVAYELDLFE------EGSIANLTASIIGNVFSFKP [134] RHODOBACTER_1 RVEPVPGTPGQYFCYVAYDLILFE------EGSIANLTASIIGNVFSFKP [131] ALCALIGENES_c_ATCC RVDPVPNNPEQFFCYVAYDLSLFE------EGSIANLTASIIGNVFSFKP [132] alcaligenes_c_H16 RVDPVPNNPEQFFCYVAYDLSLFE------EGSIANLTASIIGNVFSFKP [131] alcaligenes_p_H16 RVDPVPNNPEQFFCYVAYDLSLFE------EGSIANLTASIIGNVFSFKP [132] CRYPTOMONAS RVDPVPGATDQYFAYIAYELDLFE------EGSLANLTASIIGNVFGFKA [133] CYANIDIUM KVDQVPNNPEQYFAYIAYELDLFE------EGSIANLTASIIGNVFGFKA [138] ANTITHAMNION KVDAVPNTSDQYFAYIAYDIDLFE------EGSIANLTASIIGNVFGFKA [133] PORPHYRIDIUM RVDPVPSSPDQYFAYIAYDIDLFE------EGSIANLTASIIGNVFGFKA [133] ahnfeltia KVDAVPNTPDQYFAYIAYDIDLFE------EGSIANLTASIIGNVFGFKA [137] ECTOCARPUS RVDPVPGTSDQFFAYIAYECDLFE------EGSLANLTASIIGNVFGFKA [133] PYLAIELLA RVDPVPGTSDQFFAYIAYECDLFE------EGSLANLTASIIGNVFGFKA [133] OLISTHODISCUS RVDPVPSAADQYFAYIAYECDLFE------EGSLANMTASIIGNVFGFKA [133] CYLINDROTHECA RVDPVPNAADQYFAFIAYECDLFE------EGSLANLTASIIGNVFGFKA [133] Mn_bacterium RVDQVPNTDDQYFAYIAYDLDLFE------NGSIANLTASIIGNVFGFKP [131] hydrogenovibrioIa RIEDVPGDDSAFYAFIAYPIDLFE------EGSIVSVMTSLVGNVFGFKA [121] hydrogenovibrioIb RIEDVPGDKNAFYAFIAYPLDLFE------EGSVVNVLTSLVGNVFGFKA [122] pseudomonas_hy AIEDVPGDDEAFYAFIAYPMGLFE------EGSVVNVFTSLVGNVFGFKA [123] thiobacil_ferr_fe1 RIEDVPGDDTCFYAFVAYPIDLFE------EGSVVNVFTSLVGNVFGFKA [122] thiobacil_ferr_ATC RIEDVPGDDTCFYAFIAYPIDLFE------EGSVVNVFTSLVGNVFGFKA [122] Thiobacil_denit_I AIEDVPGDDTCFYAFIAYPIDLFE------EGSVVNVFTSLVGNVFGFKA [122] CHROMATIUM_A AIEDVPGDDTCFYAFIAYPIDLFE------EGSVVNVFTSLVGNVFGFKA [121] CHROMATIUM_L RIEDVPGDKESFYAFIAYPLDLFE------EGSIVNVLTSLVGNVFGFKA [122] ALVINO_symb AIEDVPGDEEAFYAFIAYPIDLFE------EGSVVNVFTSLVGNVFGFKA [121] nitrobacter RLEDVPGDDTCYYAFIAYPIDLFE------EGSVVNVFTSLVGNVFGFKA [122] synechococcus DIEPLPGEDNQFIAYIAYPLDLFE------EGSVTNMLTSIVGNVFGFKA [129] synechocystis DLEAVPNEDNQYFAFIAYPLDLFE------EGSVTNVLTSLVGNVFGFKA [124] ANABAENA DIEPGPGEDNQSIAYIAYPLDLFE------EGSITNVLTYIVGNVFVFKA [130] ANACYSTIS HIEPVQGEENSYFAFIAYPLDLFE------EGSVTNILTSIVGNVFGFKA [126] PROCHLOROTHRIX EVEPVPGEDNQYFCFVAYPLDLFE------EGSVTNILTSIVGNVFGFKA [124] prochlorococcus RIEDVPGDPEAFYAFIAYPLDLFE------EGSITNVLTSLVGNVFGFKA [138] prochloron DIEPIPGEDNQFFAFIAYPLDLFE------EGSVTNMLTSIVGNVFGFKA [138] CYANOPHORA GFEPVPGEENQYICYVAYPLDLFE------EGSVTNMLTSIVGNVFGFKA [129] EUGLENA DLEPVPGESNQYIAYVAYPIDLFE------EGSVTNLLTSIVGNVFGFKA [129] pyramimonas DIEPVPGEENQYICYIAYQFDLFE------EGSVTNLFTSIVGNVFGFKA [137] C.MOEWUSII DIEPVPGEDNQYIAYVAYPIDLFE------EGSVTNLFTSIVGNVFGFKA [129] CHLAMYDOMONAS DIEPVPGEDNQYIAYVAYPIDLFE------EGSVTNMFTSIVGNVFGFKA [129] CHLORELLA DIEPVPGEENQYIAYIAYPLDLFE------EGSVTNLFTSIVGNVFGFKA [129] BRYOPSIS DLEPVKGEENQYIAYVAYPLDLFE------EGSVTNLFTSIVGNVFGFKA [129] coleochaete DIEPVAGEDNQYIAYVAYPLDLFE------EVSVTNLFTSIVGNVFGFKA [129] LIVERWORT DIDPVPGEENQYIAYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] DOUGFIR DIEAVPGEESQFIAYVAYPLDLFE------EGSVTNLFTSIVGNVFGFKA [129] N.ACUMINATA RIERVVGEKDQYIAYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] TOBACCO RIERVVGEKDQYIAYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] PETUNIA RIERVIGERDQFIAYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] PEA EIEPVPGEDNQFIAYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] ALFALFA HIEPVAGEETQFIAYVAYPLDLFE------EGSVNYMFTSIVGNVFGFKA [129] BARLEY HIEPVAGEDSQWICYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] MAIZE HIEPVPGDPDQYICYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] RICE HIEPVVGEDNQYIAYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] SPINACH HIEPVAGEENQYICYVAYPLDLFE------EGSVTNMFTSIVGNVFGFKA [129] [ 160 170 180 190 200] [ . . . . .] RHODOSPIRILLUM_II VEYAKMHDFYVPEAYRALFDGPSVNISALWKVLGRPEVDGGLVVGTIIKP [167] RHODOBACTER_II VEYAKMHDFYVPPCYLRLFDGPSMNIADMWRVLGRDVRNGGMVVGTIIKP [165] Rhodobacter_cap_II VEYAKMHDFYVPPCYLRLFDGPSMNIADMWRVLGRPVVDGGMVVGTIIKP [167] hydrogenovibrioII HDGLRMLDFSAPEKMVTRFDGPATDISDLWKVLGRPEVDGGYIAGTIIKP [172] thiobacil_denit_II IEHAKMIDFYVPERCIQMFDGPATDISNLWRILGRPVVNGGYIAGTIIKP [167] Gonyaulax_II VEYGKIYDIYFPPSYLRFFDGPACSILDMWRILGRDMTDGGLVVGTIIKP [200] XANTHOBACTER LKACRLEDMRLPVAYVKTFRGPPTGIVVERERLDKF---GRPLLGATTKP [181] RHODOBACTER_1 LKAARLEDMRFPVAYVKTYKGPPTGIVGERERLDKF---GKPLLGATTKP [178] ALCALIGENES_c_ATCC IKAARLEDMRFPVAYVKTFAGPSTGIIVERERLDKF---GRPLLGATTKP [179] alcaligenes_c_H16 IKAARLEDMRFPVAYVKTFAGPSTGIIVERERLDKF---GRPLLGATTKP [178] alcaligenes_p_H16 IKAARLEDMRFPVAYVKTFAGPSTGIIVERERLDKF---GRPLLGATTKP [179] CRYPTOMONAS VNALRLEDMRLPIAYLKTFQGPATGVIVERERLDKY---GRPLLGATVKP [180] CYANIDIUM VKALRLEDMRLPFAYIKTFQGPATGVILERERLDKF---GRPLLGCTTKP [185] ANTITHAMNION IKALRLEDMRIPVAYLKTIQGPATGIIVERERMDKF---GRPFLGPTVKP [180] PORPHYRIDIUM VKALRLEDMRIPVAYLKTFQGPATGVVVERERMNNF---GRPLLGATVKP [180] ahnfeltia VKALRLEDMRMPVAYLKTFQGPATGIIVERERMDKF---GRPFLGATVKP [184] ECTOCARPUS VKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKF---GRPFLGATVKP [180] PYLAIELLA VKALRLEDMRIPYAYLKTFQGPATGVVVERERLDKF---GRPLLGATVKP [180] OLISTHODISCUS VAALRLEDMRIPYAYLKTFQGPATGIIVERERLDTF---GRPLLGATVKP [180] CYLINDROTHECA VAALRLEDMRIPHSYLKTFQGPATGIVVERERLNKY---GTPLLGATVRP [180] Mn_bacterium LKGLRLEDMRLPTAYVKTFQGPATGIVVERERLDKF---GRPLLGATVKP [178] hydrogenovibrioIa LRSIRLEDIRFPLAYVMTCGGPPHGIQVERDKMDKY---GRPMLGCTIKP [168] hydrogenovibrioIb VRSLRLEDLRFPIAFIKTCGGPPSGIQVERDKLNKY---GRPMLGCTIKP [169] pseudomonas_hy VRSLRLEDVRIPLWFVTTCPGPPHGIYVERDKLNKY---GRPLLGCTIKP [170] thiobacil_ferr_fe1 VRALRLEDVRFPLAYVKTCNGPPHGIQVERDKMNKY---GRPMLGCTIKP [169] thiobacil_ferr_ATC VRALRLEDVRFPIAYVKTCGGPPHGIQVERDIMNKY---GRPLLGCTIKP [169] Thiobacil_denit_I VRALRLEDVRFPIAYVKTCGGPPHGIQVERDVMNKY---GRPLLGCTIKP [169] CHROMATIUM_A VRALRLEDVRFPIAYVMTCNGPPHAIQVERDIMNKY---GRPMLGCTIKP [168] CHROMATIUM_L VRALRLEDIRFPLHYVKTCGGPRNGIQVERDRMDKY---GRPFLGATVKP [169] ALVINO_symb IRALRLEDVRFPIAYVMTCNGPPHGIQVERDIMNKY---GRPLLGCTIKP [168] nitrobacter VRALRLEDLRFPIAYVKTCGGPPHGIQVERDKLNKY---GRPLLGCTIKP [169] synechococcus LKALRLEDLRIPVAYLKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] synechocystis LRALRLEDIRFPVALIKTFQGPPHGITVERDKLNKY---GRPLLGCTIKP [171] ANABAENA LRALRLEDIRFPVAYIKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [177] ANACYSTIS IRSLRLEDIRFPVALVKTFQGPPHGIQVERDLLNKY---GRPMLGCTIKP [173] PROCHLOROTHRIX LRALRLEDIRFPIALVKTFQGPPHGIQVERDRLNKY---GRPLLGCTIKP [171] prochlorococcus LRHLRLEDIRFPIAFIKTCGGPPNGIVVERDRLNKY---GRPLLGCTIKP [185] prochloron LRALRLEDLRIPVAYLKTFQGPPHGITVERDKLNKY---GRPLLGCTIKP [185] CYANOPHORA LRALRLEDLRIPVGYSKTFQGPPHGITVERDKLNKY---GRALLGCTIKP [176] EUGLENA LRALRLEDLRIPPAYSKTFWGPPHGIQVERDRLNKY---GRPLLGCTIKP [176] pyramimonas LRALRLEDLRISPAYAKTFLGPPHGIQVERDRLNKY---GRPLLGCTIKP [184] C.MOEWUSII LRALRLEDLRIPPAYVKTFSGPPHGIQVERDKINKY---GRGLLGCTIKP [176] CHLAMYDOMONAS LRALRLEDLRIPPAYVKTFVGPPHGIQVERDKLNKY---GRGLLGCTIKP [176] CHLORELLA LRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKY---GRGLLGCTIKP [176] BRYOPSIS LRALRLEDLRISVAYAKTFQGPPHGIEVERDKLNKY---GRPLLGCTIKP [176] coleochaete LRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] LIVERWORT LRALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] DOUGFIR LRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] N.ACUMINATA LRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] TOBACCO LRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] PETUNIA LRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] PEA LRALRLEDLRIPYAYVKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] ALFALFA LRALRLEDLRIPAAYVKTFQGPPQGIQVERDKLNKY---GRPLLGCTIKP [176] BARLEY LRALRLEDLRIPPTYSKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] MAIZE LRALRLEDLRIPPAYSKTFQGPPRGMQVERDKLNKY---GRPLLGCTIKP [176] RICE LRALRLEDLRIPPTYSKTFQGPPHGMEVERDKLNKY---GRPLLGCTIKP [176] SPINACH LRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLNKY---GRPLLGCTIKP [176] [ 210 220 230 240 250] [ . . . . .] RHODOSPIRILLUM_II KLGLRPKPFAEACHAFWLGG-DFIKNDEPQGNQPFAPLRDTIALVADAMR [216] RHODOBACTER_II KLGLRPKPFADACHEFWLGA-DFIKNDEPQGNQTPAPLKETIRLVADAMK [214] Rhodobacter_cap_II KLGLRPKPFADACYEFWLGG-DFIKNDEPQGNQTFAPLKETIRLVADAMK [216] hydrogenovibrioII KLGLRPEPFAKACYDFWLGG-DFIKNDEPQANQNFCPMEVVIPKVAEAMD [221] thiobacil_denit_II KLGLRPEPFAKAAYQFWLGG-DFIKNDEPQGNQVFCPLKKVLPLVYDAMK [216] Gonyaulax_II KLGLQPKPFGEACYAFGQGG-DFIKNDEPQGNQVFCQMNECIPEVVTAMK [249] XANTHOBACTER KLGLSGKNYGRVVYEGLKGGLDFVKDDENINSQPFMHWRDRFLYCMEAVN [231] RHODOBACTER_1 KLGLSGKNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYVMEAVN [228] ALCALIGENES_c_ATCC KLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLFVMDAVN [229] alcaligenes_c_H16 KLGLSGRNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLFVMDAVN [228] alcaligenes_p_H16 KLGLSGRNYGRVVYEGLKRGLDFMKDDENINSQPFMHWRDRFLFVMDAVN [229] CRYPTOMONAS KLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWKERFLFGIEGVN [230] CYANIDIUM KLGLSGKNYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFVMEAVN [235] ANTITHAMNION KLGLSGKNYGRVVYEGLRGGLDFLKDDENINSQPFMRWKERFLYSMEAVN [230] PORPHYRIDIUM KLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLFCMEGVN [230] ahnfeltia KLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMXXKERYLYSIEGVN [234] ECTOCARPUS KLGLSGKNYGRVVYEGLTGGLDFLKDDENINSQPFMRWKERFLYCMEGVN [230] PYLAIELLA KLGLSGKNYGRVVYEGLAGGLDFLKDDENINSQPFMRWKERFLYCMEGVN [230] OLISTHODISCUS KLGLSGKNYGRVVYEGLRGGIDFLKDDENINSQPFMRWRERFLYCMEGIN [230] CYLINDROTHECA KLGLSGKNYGRVVYEGLKGGLDFLKDDENINSQPFMRWRERFLNCMEGIN [230] Mn_bacterium KLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMDWRERFLYCMEAVN [228] hydrogenovibrioIa KLGLSAKNYGRAVYECLRGGLDFTKDDENVTSQPFMRWRDRFLFCQDAIE [218] hydrogenovibrioIb KLGLSAKNYGRAVYECLRGGLDLTKDDENINSQPFQRWRDRFEFVAEAVD [219] pseudomonas_hy KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCQEAIE [220] thiobacil_ferr_fe1 KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFIAWRDRFLFVADAIH [219] thiobacil_ferr_ATC KLGLSAKNYGRACYEGLRGGLDFTKDDENVNSQPFMRWRQRFDFVMEAIQ [219] Thiobacil_denit_I KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRQRFDFVMEAIQ [219] CHROMATIUM_A KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRQRFDFVMDAID [218] CHROMATIUM_L KLGLSAKNYGRAVYEMLRGGLDFTKDDENVNSQPFMRWQNRFEFVSEAVR [219] ALVINO_symb KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRHGFDFVMEAIE [218] nitrobacter KLGLSAKNYGRACYEALRGGLDFTKDDENINSQPFMRWRDRFDFVMEAVQ [219] synechococcus KLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIH [226] synechocystis KLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWRDRFLFVQEAIE [221] ANABAENA KLGLSAKNYGRAVYECLRGGLDFTKDDENINSAPFQRWRDRFLFVADAIT [227] ANACYSTIS KLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIH [223] PROCHLOROTHRIX KLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWRDRFLFVQEAIE [221] prochlorococcus KLGLSGKNYGRVVYECLRGGLDLTKDDENINSQPFQRWRERFEFVAEAVK [235] prochloron KLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWRDRFLFVQEAIE [235] CYANOPHORA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLYVMDAIK [226] EUGLENA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQSFMRWRDRFLFCAEAIY [226] pyramimonas KLGLSAKNYGRAVYECLRGGLDFTKDDENVTSQPFMRWRDRFLFCAEAIY [234] C.MOEWUSII KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIY [226] CHLAMYDOMONAS KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIY [226] CHLORELLA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIY [226] BRYOPSIS KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIY [226] coleochaete KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIF [226] LIVERWORT KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFVAEAIY [226] DOUGFIR KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEALY [226] N.ACUMINATA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIY [226] TOBACCO KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALY [226] PETUNIA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIY [226] PEA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIY [226] ALFALFA KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIY [226] BARLEY KLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIY [226] MAIZE KLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIY [226] RICE KLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIY [226] SPINACH KLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALY [226] [ 260 270 280 290 300] [ . . . . .] RHODOSPIRILLUM_II RAQDETGEAKLFSANITADDPFEIIARGEYVLETFGE--NASHVALLVDG [264] RHODOBACTER_II RAQDETGEAKLFSANITADDHYENVARGEYILETFGE--NADHVAFLVDG [262] Rhodobacter_cap_II RAQDETGEAKLFSANITADDHYEMVARGEYILETFGE--NADHVAFLVDG [264] hydrogenovibrioII RAQQATGQAKLFSANVTADFHEEMIKRGEYVLGEFAKYGNEKHVAFLVDG [271] thiobacil_denit_II RAQDDTGQAKLFSMNITADDHYEMCARADYALEVFGP--DADKLAFLVDG [264] Gonyaulax_II ACIKETGSEKLFSANITADDPAEMIARGKYILGQFGP--MAENCAFLVDG [297] XANTHOBACTER KAQAETGEVKGHYLNITAGTMEEMYRRADFAKELG-------SVVVMVD- [273] RHODOBACTER_1 LASAQTGEVKGHYLNITAGTMEEMYRRAEFAKSLG-------SVIVMVD- [270] ALCALIGENES_c_ATCC KASAATGEVKGSYLNVTAGTMEEMYRRAEFAKSLG-------SVIIMVD- [271] alcaligenes_c_H16 KASAATGEVKGSYLNVTAGTMEEMYRRAEFAKSLG-------SVIIMID- [270] alcaligenes_p_H16 KASAATGEVKGSYLNVTAGTMEEMYRRAEFAKSLG-------SVVIMID- [271] CRYPTOMONAS RAAAAAGEVKGHYFNVTAGTMEDMYERAEFCKEIG-------SVICMID- [272] CYANIDIUM KAAAATGEVKGHYLNVTAATMEEMYARAQLAKELG-------SVIIMID- [277] ANTITHAMNION RSIAATGEVKGHYMNVTASTMEDMYERAEFAKQLG-------TVIIMID- [272] PORPHYRIDIUM RASASSGEVKGHYLNVTAATMEDMYERAEFSKEVG-------SIICMID- [272] ahnfeltia RAVAASGEIKGHYLNVTAATMEDMYERAEFAKELG-------SIIIMXX- [276] ECTOCARPUS RAAAATGEVKGSYLNITAATVEQMYERAEYAHAIG-------SVIVMID- [272] PYLAIELLA RAAAATGEVKGSYLNITAATMEQMYERAEYAHSIG-------SVIVMID- [272] OLISTHODISCUS RASAASGEVKGSYLNVTAATMEEMYERADYAKAVG-------SVIVMID- [272] CYLINDROTHECA RASAATGEVKGSYLNVTAATMEEVYKRSEYAKEVG-------SIIIMID- [272] Mn_bacterium KAQAATGEIKGTYLNVTAATMEDMYERAEFARDLG-------SNIIMID- [270] hydrogenovibrioIa KAQDETGERTGHYLNATAGTPEEMYERAEFAKEIG-------SPIVMHDF [261] hydrogenovibrioIb KATAETGERKGHYLNVTAGTVEEMMKRAEFAKELG-------QPIIMHDF [262] pseudomonas_hy KAQAETGERKGHYMNVTGPTMEEIYKRAEFAKEIG-------TPIIMIDY [263] thiobacil_ferr_fe1 TAEAETGERKGHYLNVTAPSPEEMYERAEFAKELN-------MPIIMHDF [262] thiobacil_ferr_ATC KAEAETGERKGHYLNVTAPTPEEMYKRAEYAKEIG-------APIIMHDY [262] Thiobacil_denit_I KSERETGERKGHYLNVTAPTPEEMYKRAEYAKEIG-------APIIMHDY [262] CHROMATIUM_A KAERETGERKGHYLNVTAPTPEEMYKRAEYAKEIG-------APIIMHDY [261] CHROMATIUM_L KAREETGERKGHYLNVTAPTCEEMFKRAEFAKECG-------APIIMHDF [262] ALVINO_symb KAERETGERKGHYLNVTAPTPDEMFKRAEYAKEIG-------APIIMHDY [261] nitrobacter KAEHETGERKGHYLNVTAPTPEEMYKRAEYAKEIR-------APIIMHDY [262] synechococcus KAQAETGEIKGHYLNVTAPTCEEMLKRAEFAK-DW-------NAIIMHDF [268] synechocystis KAQAETNEMKGHYLNVTAGTCEEMMKRAEFAKEIG-------TPIIMHDF [264] ANABAENA KAQAETGEIKGHYLNVTAPTCEEMLKRAEYAKELK-------QPIIMHDY [270] ANACYSTIS KSQAETGEIKGHYLNVTAPTCEEMMKRAEFAKELG-------MPIIMHDF [266] PROCHLOROTHRIX KAQAETGEVKGHYLNVTAATCEEMLKRAEFAKEIG-------TPIIMHDF [264] prochlorococcus LAQRETGEVKGHYLNCTANTPEELYERAEFAKELD-------MPIIMHDY [278] prochloron KAQAETNEIKGHYLNVTAPTLEQMMERAEFAKEIG-------TPIIMHDY [278] CYANOPHORA KSQAETGEIKGHYLNATAPTSEEMIKRAEFAAELD-------APIIMHDY [269] EUGLENA KAQTETGEVKGHYLNATAGTCEEMYKRASFAAQIG-------VPIIMHDY [269] pyramimonas RSQAETGEIKGHYLNTTAATSEEVLRRAEFARDLG-------VPIVMHDY [277] C.MOEWUSII KAQAETGEVKGHYLNATAGTSEEMIKRAVCAKEFG-------VPIIMHDY [269] CHLAMYDOMONAS KAQAETGEVKGHYLNATAGTCEEMMKRAVCAKELG-------VPIIMHDY [269] CHLORELLA KSQAETGEIKGHYLNATAATAEAMMQRAECAKDLG-------VPIIMHDY [269] BRYOPSIS KSQAETGEIKGHYLNATAATCEAMLQRAQCAKELG-------VPIIMHDY [269] coleochaete KSQAETGEIKGHYLNATAGTSEEMMKRAQFARELG-------VPIIMHDY [269] LIVERWORT KSQAETGEIKGHYLNATAGTCEEMLKRAACARELG-------VPIVMHDY [269] DOUGFIR KAQAETGEIKGHYLNATAGTCEEMMKRAVFARELG-------VPIVMHDY [269] N.ACUMINATA KAQTETGEIKGHYLNATAGTCEEMIKRAVFARELG-------VPIVMHDY [269] TOBACCO KAQAETGEIKGHYLNATAGTCEEMIKRAVFARELG-------VPIVMHDY [269] PETUNIA KSQAETGEIKGHYLKATAGTCEEMMKRAVFARELG-------VPIVMHDY [269] PEA KSQAETGEIKGHYLNATAGTCEEMLKRAVFARELG-------VPIVMHDY [269] ALFALFA KAQAETGEIKGHYLNATAGTCEEMMKRAVFARELG-------VPIVMHDY [269] BARLEY KSQAETGEIKGHYLNATAGTCEEMIKRAVFARELG-------VPIVMHDY [269] MAIZE KSQAETGEIKGHYLNATAGTCDEMIKGAVFARQLG-------VPIVMHDY [269] RICE KSQAETGEIKGHYLNATAGTCEEMIKRAVFARELG-------VPIVMHDY [269] SPINACH KAQAETGEIKGHYLNATAGTCEDMMKRAVFARELG-------VPIVMHDY [269] [ 310 320 330 340 350] [ . . . . .] RHODOSPIRILLUM_II YVAGAAAITTARRRFPDN--FLHYHRAGHGAVTSPQSKRGYTAFVHCKMA [312] RHODOBACTER_II YVTGPAAITTARRQFPRQ--FLHYHRAGHGAVTSPQSMRGYTAFVLSKMA [310] Rhodobacter_cap_II YVTGPAAITTARRSFPRQ--FLHYHRAGHGAVTSPQSMRGYTAFVLSKMS [312] hydrogenovibrioII FVTGPAGVTTSRRAFPDT--YLHFHRAGHGAVTSYKSPMGMDPLCYMKLA [319] thiobacil_denit_II YVGGPGMVTTARRQYPGQ--YLHYHRAGHGAVTSPSAKRGYTAIVLAKMS [312] Gonyaulax_II YVAGGTAVTVARRNFPKQ--FLHYHRAGHGAVTSPQTQRGYTAFVHTKIS [345] XANTHOBACTER LIVGWTAIQSISNWCRENDMLLHMHRAGHGTYTR-QKGHGISFRVIAKWL [322] RHODOBACTER_1 LIIGYTAIQSISEWCRQNDMILHMHRAGHGTYTR-QKNHGISFRVIAKWL [319] ALCALIGENES_c_ATCC LIVGWTCIQSMSNWCRQNDMILHLHRAGHGTYTR-QKNHGVSFRVIAKWL [320] alcaligenes_c_H16 LIVGWTCIQSMSNWCRQNDMILHLHRAGHGTYTR-QKNHGVSFRVIAKWL [319] alcaligenes_p_H16 LIVGWTCIQSMSNWCRQNDMILHLHRAGHGTYTR-QKNHGVSFRVIAKWL [320] CRYPTOMONAS LVIGYTAIQSMAIWARKNSMILHLHRAGNSTYSR-QKTHGMNFRVICKWM [321] CYANIDIUM LVIGYTAIQTMAKWARDNDMILHLHRAGNSTYSR-QKNHGMNFRVICKWM [326] ANTITHAMNION LVIGYTAIQSMGIWARKNDMILHLHRAGNSTYSR-QKIHGMNFRVICKWM [321] PORPHYRIDIUM LVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSR-QKNHGMNFRVICKWM [321] ahnfeltia XVIGYTAIQSMAKWARRHDMILHLHRAGNSTYSR-QKDHGMNFRVICKWM [325] ECTOCARPUS LVIGYTAIQSMAIWARKAEVILHLHRAGNSTYAR-QKNHGINFRVICKWM [321] PYLAIELLA LVIGYTAIQSMAIWARKYEMILHLHRAGNSTYAR-QKNHGINFRVICKWM [321] OLISTHODISCUS LVIGYTAIQSMAIWARKNDMILHLHRAGNSTYAR-QKNHGINFRVICKWM [321] CYLINDROTHECA LVMGYTAIQSIALWAREQDMLLHLHRAGNSTYAR-QKNHGINFRVICKWM [321] Mn_bacterium LVIGWTAMQSMAKWARRNNMILHLHRAGHSTYTR-QKTHGVSFRVIAKWA [319] hydrogenovibrioIa LTGGLTANTGLANYCRKNGLLLHIHRAMHGVIDR-NPLHGIHFRVLSKVL [310] hydrogenovibrioIb LTAGFTANTTLANWCRENGMLLHIHRAMHAVIDR-NPLHGIHFRVLAKCL [311] pseudomonas_hy LTVGWAATQSLSKWCRDNGMLLHVHRAMHAVIDR-NPKHGINFRVLAKIM [312] thiobacil_ferr_fe1 LTGGFCANTGLARWCRKNGVLLHIHRAMHAVVDR-NPHHGIHFRVLAKAL [311] thiobacil_ferr_ATC ITGGFCANTGLANWCRDNGMLLHIHRAMHRVLDR-NPHHGIHFRVLTKIL [311] Thiobacil_denit_I ITGGFCANTGLANWCRDNGMLLHIHRAMHAVLDR-NPHHGIHFRVLTKIL [311] CHROMATIUM_A ITGGFCANTGLAQWCRDNGVLLHIHRAMHAVLDR-NPHHGIHFRVLTKIL [310] CHROMATIUM_L LTGGFTANTSLANWCRDNGMLLHIHRAMHAVIDR-HPKHGIHFRVLAKCL [311] ALVINO_symb ITGGFTANTGLAQWCRDNGVLLHIHRAMHAVLDR-NPHHGIHFRVLTKIL [310] nitrobacter LAGGLCANAGLANWCRNNGMLLHIHRAMHAVIDR-NPHHGIHFRVLTKIL [311] synechococcus LTAGFTANTTLSKGCRDNGMLLHIHRAMHAVMDR-QKNHGIHFRVLAKCL [317] synechocystis FTGGFTANTTLARWCRDNGILLHIHRAMHAVVDR-QKNHGIHFRVLAKCL [313] ANABAENA LTAGFTANNTLARWCRDNGLLLHIHRAMHAVIDR-QKNHGIHFRVLAKAL [319] ANACYSTIS LTAGFTANTTLAKWCRDNGVLLHIHRAMHAVIDR-QRNHGIHFRVLAKCL [315] PROCHLOROTHRIX LTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDR-QRIHGIHFRVLAKCL [313] prochlorococcus ITGGFTANTGLANWCRKNGMLLHIXXXXXXXXXX-XXXXXXXXXXXXXXX [327] prochloron ITGGFTANTTLARWCQRNGVLLHIXXXXXXXXXX-XXXXXXXXXXXXXXX [327] CYANOPHORA ITAGFTSNTTLARWCRDNGPLLHIHRAMHAVIDR-QKNHGIHFRVLAKTL [318] EUGLENA LTGGFTANTSLAMYCRDNGLLLHIHRAMHAVIDR-QRNHGIHFRVLAKTL [318] pyramimonas LTGGFTVNTSLANYCRNNGLLLHIHRAMHAVIDR-QRNHGIHFRVLAKAL [326] C.MOEWUSII LTGGFTANTSLSNYCRDHGLLLHIHRAMHAVIDR-QRNHGIHFRVLAKAL [318] CHLAMYDOMONAS LTGGFTANTSLAIYCRDNGLLLHIHRAMHAVIDR-QRNHGIHFRVLAKAL [318] CHLORELLA LTGGFTANTSLSHYCRDNGLLLHIHRAMHAVIDR-QRNHGITFRVLAKAL [318] BRYOPSIS LTGGWTANTSLAHYCRDHGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKSL [318] coleochaete LTGGFTSNTSLSHYCRDNGLLLHIHRAMHAVIDR-QKNHGIHFRVLAKAL [318] LIVERWORT LTGGFTANTSLAFYCRDNGLLLHIHRAMHAVIDR-QKNHGIHFRVLAKAL [318] DOUGFIR LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDR-QRNHGMHFRVLAKAL [318] N.ACUMINATA LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDR-QKNHGIHFRVLAKAL [318] TOBACCO LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDR-QKNHGIHFRVLAKAL [318] PETUNIA LTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDR-QKNHGIHFRVLAKAL [318] PEA LTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKAL [318] ALFALFA LTVGFTANTTLAHYCRDNGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKAL [318] BARLEY LTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKAL [318] MAIZE LTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKAL [318] RICE LTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKAL [318] SPINACH LTGGFTANTTLSHYCRDNGLLLHIHRAMHAVIDR-QKNHGMHFRVLAKAL [318] [ 360 370 380 390 400] [ . . . . .] RHODOSPIRILLUM_II RLQGASGIHTGTMGFGKMEGES-SDRAIAYMLTQDEAQ-----GPFYRQS [356] RHODOBACTER_II RLQGASGIHTGTMGYGKMEGEA-ADKIMAYMLTDEAAE-----GPFYRQT [354] Rhodobacter_cap_II RLQGASGIHTGTMGYGKMEGDA-SDKIMAYMLNDEAAQ-----GPFYHQD [356] hydrogenovibrioII RLMGASGIHTGTMVYGKMEGHN-DERVLAYMLERDECQ-----GPYFYQK [363] thiobacil_denit_II RVQGASGDHTGTMGFGKLEGEG-SERTIAYMLTEDQPQ-----GPFFRQS [356] Gonyaulax_II RVIGASGIHVGTMSFGKMEGDA-SDKGIAYMLQQDAAD-----GPYYHQE [389] XANTHOBACTER RLAGVDHLHTGTAV-GKLEGDPMTVQGYYNVCREDVTRTDYTRGIFFDQD [371] RHODOBACTER_1 RLAGVDHLHCGTAV-GKLEGDPLTVQGYYNVCREPFNTVDLPRGIFFEQD [368] ALCALIGENES_c_ATCC RLAGVDHMHTGTAV-GKLEGDPLTVQGYYNVCRDAYTQTDLTRGLFFDQD [369] alcaligenes_c_H16 RLAGVDHMHTGTAV-GKLEGDPLTVQGYYNVCRDAYTHADLSRGLFFDQD [368] alcaligenes_p_H16 RLAGVDHMHTGTAV-GKLEGDPLTVQGYYNVCRDAYTHTDLTRGLFFDQD [369] CRYPTOMONAS RMAGVDHIHAGTVV-GKLEGDPLMVKGFYNTLLETQTDVNLVQGLFFAQD [370] CYANIDIUM RMAGVDHIHAGTVV-GKLEGDPIITRGFYKTLLLPKLERNLQEGLFFDMD [375] ANTITHAMNION RMAGVDHIHAGTVV-GKLEGDPLMIRGFYNTLLLSELAIDLPKGIFFEQD [370] PORPHYRIDIUM RMAGVDHIHAGTVV-GKLEGDPLMIKGFYNTLLEPHLNINLPEGLFFEQN [370] ahnfeltia RMAGVDHIHAGTVV-GKLEGDPLMIRGFYNTLLLPKLEVNLPQGIFFEQD [374] ECTOCARPUS RMCGVDHIHAGTVV-GKLEGDPLMVKGFYNSLLLTHLKINLAEGLFFDMD [370] PYLAIELLA RMCGVDHIHAGTVV-GKLEGDPLMVKGFYNSLLLTHLKINLAEGLFFDMD [370] OLISTHODISCUS RMAGVDHIHAGTVV-GKLEGDPLMVKGFYDVLRETELSINLPQGIFFEMD [370] CYLINDROTHECA RMSGVDHIHAGTVV-GKLEEDPLMIKGFYDTLRLTTLDVNLPYGLFFEMS [370] Mn_bacterium RLAGVDHIHAGTVV-GKLEGDPATTKGYYDICRDEFTHRKLENGIFFDQP [368] hydrogenovibrioIa RLSGGDHLHSGTVV-GKLEGDRGSDLGWIDIMRDSFIAEDRSRGIMFDQD [359] hydrogenovibrioIb RLSGGDHLHTGTVV-GKLEGDRASTLGFVDQLRESFVPEDRSRGVFFDQD [360] pseudomonas_hy RLIGGDHLHSGTVV-GKLEGDRAATLGWIDLMRDRYVKADRSRGIFFDQD [361] thiobacil_ferr_fe1 RLSGGDHLHTGTVV-GKLEGDRAATQGWVDLLRESFVPEDAGRGIFFDQD [360] thiobacil_ferr_ATC RLSGGDHLHSGTVV-GKLEGDREATLGWIDIMRDRFIKEDRSRGIFFDQD [360] Thiobacil_denit_I RLSGGDHLHSGTVV-GKLEGDREATLGWIDMMRDSFVKEDRSRGIFFDQD [360] CHROMATIUM_A RLSGGDHLHTGTVV-GKLEGDRASTLGWIDLLRESYIKEDRSRGLFFDQD [359] CHROMATIUM_L RLSGGDHLHTGTVV-GKLEGDRQSTLGFVDQLRESFIPEDRSRGLFFDQD [360] ALVINO_symb RLSGGDHLHTGTVV-GKLEGDREATLGWIDLLRESYIKEDRSRGIFFDQD [359] nitrobacter RLSGGDHLHTGTVV-GKLEGDRASTLGWIDLLRESFVPEDRSRGIFFDQD [360] synechococcus RMSGGDHIHTGTVV-GKLEGDKAVTLGFVDLLRENYIEQDRSRGIYFTQD [366] synechocystis RLSGGDHLHSGTVV-GKLEGERGITMGFVDLMREDYVEEDRSRGIFFTQD [362] ANABAENA RLSGGDHIHTGTVV-GKLEGERGITMGFVDLLRENYVEQDKSRGIYFTQD [368] ANACYSTIS RLSGGDHLHSGTVV-GKLEGDKASTLGFVDLMREDHIEADRSRGVFFTQD [364] PROCHLOROTHRIX RLSGGDHLHSGTVV-GKLEGEKDITLGFVDLMREDHIEEDRSRGVFFTQD [362] prochlorococcus XXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [376] prochloron XXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX [376] CYANOPHORA RMSGGDHLHSGTVV-GKLEGDRAGTLGFVDLMRDDHIEQDRSRGIFFTQD [367] EUGLENA RMSGGDHLHSGTVV-GKLEGEREVTLGFVDLMRDAYVEKDRSRGIYFTQD [367] pyramimonas RMSGGDHLHSGTVV-GKLEGEREVTLGFVDLMRDAYIEKDRSRGIYFTQD [375] C.MOEWUSII RMSGGDHLHSGTVV-GKLEGEREVTLGFVDLMRDNYIEKDRSRGIYFTQD [367] CHLAMYDOMONAS RMSGGDHLHSGTVV-GKLEGEREVTLGFVDLMRDDYVEKDRSRGIYFTQD [367] CHLORELLA RLSGGDHLHSGTVV-GKLEGEREVTLGFVDLMRDDYIEKDRSRGIYFTQD [367] BRYOPSIS RMSGGDHLHSGTVV-GKLEGEREVTLGFVDLMRDDFIEKDRARGIYFTQD [367] coleochaete RMSGGDHIHSGTVV-GKLEGEREVTLGFVDLLRDDYIEKDRSRGIYFTQD [367] LIVERWORT RMSGGDHIHAGTVV-GKLEGDRQVTLGFVDLLRDDYIEKDRSRGIYFTQD [367] DOUGFIR RMSGGDHIHAGTVV-GKLEGERDVTLGFVDLLRDDFIEKDRSRGIYFTQD [367] N.ACUMINATA RMSGGDHIHSGTVV-GKLEGERDITLGFVDLLRDDFVEQDRSRGIYFTQD [367] TOBACCO RMSGGDHIHSGTVV-GKLEGERDITLGFVDLLRDDFVEQDRSRGIYFTQD [367] PETUNIA RMSGGDHIHSGTVV-GKLEGERDITLGFVDLLRDDFVEQDRSRGIYFTQD [367] PEA RLSGGDHIHAGTVV-GKLEGEREITLGFVDLLRDDYIKKDRSRGIYFTQD [367] ALFALFA RMSGGDHIHAGTVV-GKLEGERDITLGFVDLLRDDFIEKDRSRGIFFTQD [367] BARLEY RMSGGDHIHSGTVV-GKLEGEREMTLGFVDLLRDDFIEKDRARGIFFTQD [367] MAIZE RMSGGDHIHSGTVV-GKLEGEREITLGFVDLLRDDFIEKDRSRGIFFTQD [367] RICE RMSGGDHIHAGAVV-GKLEGEREMTLGFVDLLRDDFIEKDRARGIFFTQD [367] SPINACH RLSGGDHIHSGTVV-GKLEGERDITLGFVDLLRDDYTEKDRSRGIYFTQS [367] [ 410 420 430 440 450] [ . . . . .] RHODOSPIRILLUM_II WGGMKACTPIISGGMNALRMPGFFENLGNANVILTAGGGAFGHIDGPVAG [406] RHODOBACTER_II GWGSKATTPIISGGMNALRLPGFFDNLGHSNVIQTSGGGAFGHLDGGTAG [404] Rhodobacter_cap_II WLGMKATTPIISGGMNALRLPGFFDNLGHSNVIQTSGGGAFGHLDGATAG [406] hydrogenovibrioII WYGMKPTTPIISGGMDALRLPGFFENLGHGNVINTCGGGSFGHIDSPAAG [413] thiobacil_denit_II WARDTACSAMASGGMHGLRMPGSFENLGEPDVVLTAGGGTFGHIDGPVDA [406] Gonyaulax_II WEGIVQTTPIISGGMNALRLPAFFENLGHSNVILTAGGGTFGHKDGPKQG [439] XANTHOBACTER WAGLRKVMPVASGGIHAGQMHQLIDLFG-EDVVLQFGGGTIGHPDGIQAG [420] RHODOBACTER_1 WADLRKVMPVASGGIHAGQMHQLLSLFG-DDVVLQFGGGTIGHPMGIQAG [417] ALCALIGENES_c_ATCC WASLRKVMPVASGGIHAGQMHQLIHLFG-DDVVLQFGGGTIGHPQGIQAG [418] alcaligenes_c_H16 WASLRKVMPVASGGIHAGQMHQLISLFG-DDVVLQFGGGTIGHPQGIQAG [417] alcaligenes_p_H16 WASLRKVMPVASGGIHAGQMHQLIHLFG-DDVVLQFGGGTIGHPQGIQAG [418] CRYPTOMONAS WAALNKCMPVASGGIHCGQMHQLINYLG-DDVVLQFGGGTIGHPDGIQAG [419] CYANIDIUM WASLRKVMPVASGGIHAGQMHQLIHYLG-EDVVLQFGGGTIGHPDGIQSG [424] ANTITHAMNION WAALRKVTPVASGGIHCGQMHQLLDYLG-NDVVLQFGGGTIGHPDGIQAG [419] PORPHYRIDIUM WASLRKVMPVASGGIHCGQMHQLIDYLG-DDVVLQFGGGTIGHPDGIQAG [419] ahnfeltia WAALRKVTPVASGGIHCGQMHQLLDYLG-IDVVLQFGGGTIGHPDGIQAG [423] ECTOCARPUS WASLRKCVPVASGGIHCGQMHQLLYYLG-DDVVLQFGGGTIGHPDGIQSG [419] PYLAIELLA WAALRKCVPVASGGIHCGQMHQLLYYLG-DDVVLQFGGGTIGHPDGIQSG [419] OLISTHODISCUS WASLRKCCPVASGGIHCGQMHQLVYYLG-DDVVLQFGGGTIGHPDGIQAG [419] CYLINDROTHECA WASLRRCMPVASGGIHCGQMHQLIHYLG-DDVVLQFGGGTIGHPDGIQAG [419] Mn_bacterium WASLNKMMPVASGGIHAGQMHQLLDLLG-DDTVLQFGGGTIGHPMGIAAG [417] hydrogenovibrioIa FGEMPGVIPVASGGIHVWHMPALVAIFG-DDSVLQFGGGTIGHPWGNAVG [408] hydrogenovibrioIb WGSMPGVMAVASGGIHVWHMPALVNIFG-DDSVLQFGGGTQGHPGGNAAG [409] pseudomonas_hy WGQMPGMFPVASGGIHVWHMPALVSIFG-DDSVLQFGGGTIGHPWGNAAG [410] thiobacil_ferr_fe1 WGSMPGVFAVASGGIHVWHMPALLAIFG-DDAIFQFGGGTLGHPWGNAAG [409] thiobacil_ferr_ATC WGSMPGVMPVASGGIHVWHMPALVTIFG-DDSVLQFGGGTLGHPWGNAKG [409] Thiobacil_denit_I WGSMPGVFPVASGGIHVWHMPALVTIFG-DDSVLQFGGGTLGHPWGNAAG [409] CHROMATIUM_A WGSMPGAFAVASGGIHVWHMPALVTIFG-DDSVLQFGGGTLGHPWGNAAG [408] CHROMATIUM_L WGGMPGVMAVASGGIHVWHIPALVTIFG-DDSVLQFGGGTQGHPWGNAAG [409] ALVINO_symb WGSMPGVFAACSGGIHVWHMPALVTIFG-EHAVLQFGGGTLGHPWGN-AG [407] nitrobacter WGSMPGGFAVASGGIHVWHMPALVTIFG-DDSVLQFGGGTVGHPWGN-AL [408] synechococcus WASMPGVMAVASGGIHVWHMPALVDIFG-DDAVLQFGGGTLGHPWGNAPG [415] synechocystis YASMPGTMPVASGGIHVWHMPALVEIFG-DDSCLQFGGGTLGHPWGNAPG [411] ANABAENA WASLPGVMAVASGGIHVWHMPALVEIFG-DDFVLQFGGGTLGHPWGNARG [417] ANACYSTIS WASMPGVLPVASGGIHVWHMPALVEIFG-DDSVLQFGGGTLGHPWGNAPG [413] PROCHLOROTHRIX WASMPGVMPVASGGIHVWHMPALVEIFG-DDSCLQFGGGTLGHPWGNAPG [411] prochlorococcus XXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXX [425] prochloron XXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXX [425] CYANOPHORA WASMPGVMPVASGGIHIWHMPALVDIFG-DDSCLQFGGGTLGHPWGNAPG [416] EUGLENA WCGMGGTMPVASGGIHVWHMPALTEIFG-DDACLQFGGGTLGHPWGNAPG [416] pyramimonas WCGLPGVMXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXX [424] C.MOEWUSII WCSMAGVMPVASGGIHVWHMPALVEIFG-DDACLQFGGGTLGHPWGNAPG [416] CHLAMYDOMONAS WCSMPGVMPVASGGIHVWHMPALVEIFG-DDACLQFGGGTLGHPWGNAPG [416] CHLORELLA WVSLPGTMPVASGGIHVWHMPALVEIFG-DDACLQFGGGTLGHPWGNAPG [416] BRYOPSIS WVLLPGVMPVASGGIHVWHMPALVEIFG-DDACLQFGGGTLGHPWGNAPG [416] coleochaete WVSMPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] LIVERWORT WVSLPGVFPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] DOUGFIR WVSMPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] N.ACUMINATA WVSLPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] TOBACCO WVSLPGVLPEASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] PETUNIA WVSLPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] PEA WVSLPGVIPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] ALFALFA WVSLPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] BARLEY WVSMPGVIPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] MAIZE WVSMPGVIPVASGGIHVWHMPALTEILG-DDSVLQFGGGTLGHPWGNAHG [416] RICE WVSMPGVIPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] SPINACH WVSTPGVLPVASGGIHVWHMPALTEIFG-DDSVLQFGGGTLGHPWGNAPG [416] [ 460 470 480 490 500] [ . . . . .] RHODOSPIRILLUM_II ARSLRQAWQAWRDGVP----------VLDYAREHK-----------ELAR [435] RHODOBACTER_II AKSLRQSHEAWMAGVD----------LVTYAREHR-----------ELAR [433] Rhodobacter_cap_II AKSLRQSCDAWKAGVD----------LVTYAKSHR-----------ELAR [435] hydrogenovibrioII GISLGQAYACWKTGAE----------PIEAPR--------------EFAR [439] thiobacil_denit_II ARANRHAWEAWRDGVR----------VLDYAREHK-----------VLAR [435] Gonyaulax_II ATSCRQDEEAWKLWKA----------GTYGDVSLSDGVIEYAKTHEEIKG [479] XANTHOBACTER AIANRVALETMILARNEGRDI--KNEGPEILVEAAKWCQ-------PLRA [461] RHODOBACTER_1 ATANRVALEAMVLARNEGRNI--DVEGPEILRAAAKWCK-------PLEA [458] ALCALIGENES_c_ATCC ATANRVALEAMVLARNEGRDI--LNEGPEILRDPRRAGAA------PLRA [460] alcaligenes_c_H16 ATANRVALEAMVLARNEGRDI--LNEGPEILRDAARWCG-------PLRA [458] alcaligenes_p_H16 ATANRVALEAMVLARNEGRDI--LNEGPEILRDAARWCG-------PLRA [459] CRYPTOMONAS ATANRVALECMVVARNEGRDY--VTEGPQILRNAAKSCG-------PLQT [460] CYANIDIUM ATANRVALEAMILARNENRDF--LTEGPEILREAAKNCG-------ALRT [465] ANTITHAMNION ATANRVALESMVIARNEERDY--VAEGPQILLDAAKTCG-------PLQT [460] PORPHYRIDIUM ATANRVALESMLLARNEGRDY--VAQGPQILRDAAKTCG-------PLQT [460] ahnfeltia ATANXXXXXXXXXXXXXXXDY--VSEGPQILRDAAKTCG-------PLQT [464] ECTOCARPUS ATANRVALESMVLARNEGRDY--VGEGPDILRRAASTCG-------PLKA [460] PYLAIELLA ATANRVALESMVLARNEGRDY--VGEGPEILRRAAATCG-------PLKA [460] OLISTHODISCUS ATANRVALEAMILARNEGRDY--VSEGPEILRDIAKLCG-------PLKT [460] CYLINDROTHECA ATANRVALESMVLARNEGADYFNQEVGPQILRNAAKTCG-------PLQT [462] Mn_bacterium ATANRVALECMVLARNEGRDI--VNEGPEILQEAARSCT-------PLQQ [458] hydrogenovibrioIa AAVNLVALEACVQARNEGQEI--EKNGKEILTNDGKHSP-------ELKI [449] hydrogenovibrioIb AAANRVALEACVKARNEGRDL--EREGGDILREAARTSK-------ELAV [450] pseudomonas_hy ACANRVALEACVKARNEGLPI--EKMGREILTEAAKSCP-------ELKV [451] thiobacil_ferr_fe1 AAANRVALEACVEARNEGRDL--EREGKDILTNAAKDSP-------ELKI [450] thiobacil_ferr_ATC AAANRVALEACVEARNRGVAI--EKEGKAVLTEAAKHSP-------ELKI [450] Thiobacil_denit_I AAANRVALEACVEARNKGVAI--EKEGKTVLTEAAKNSP-------ELKI [450] CHROMATIUM_A ACANRVALEACVEARNQGVAI--EKEGKDVLTKAAASSP-------ELKI [449] CHROMATIUM_L AAANRVATEACVKARNEGVEI--EKHAREVLSDAARHSP-------ELAV [450] ALVINO_symb AAANRVALEACVEARNEGHEL--EKEGKDILIQAAKHSP-------ELKT [448] nitrobacter AHANRVALEACVQARGEGRHL--EKEGKDLLTAAAAHSP-------ELKI [449] synechococcus ATANRVALEACIQARNEGRDL--MREGGDIIREAARWSP-------ELAA [456] synechocystis ATANRVALEACVQARNEGRNL--AREGNDVIREACRWSP-------ELAA [452] ANABAENA ATANRVALEACVQARNEGRNL--AREGNDVIREAAKWSP-------ELAV [458] ANACYSTIS ATANRVALEACVQARNEGRDL--YREGGDILREAGKWSP-------ELAA [454] PROCHLOROTHRIX ATANRVALEACIQARNEGRDL--MREGGDVIREACKWSP-------ELAV [452] prochlorococcus XXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXX-------XXXX [466] prochloron XXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXX-------XXXX [466] CYANOPHORA AVANRVALEACVQARNEGRNL--AREGNEIIREAARFSP-------ELAA [457] EUGLENA AAANRVASEACVQARNEGRDL--SREGGDVIREACKWSP-------ELAA [457] pyramimonas XXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXX-------XXXX [465] C.MOEWUSII AVANRVALEACTQARNEGRDL--AREGGDVIRSACKWSP-------ELAA [457] CHLAMYDOMONAS AAANRVALEACTQARNEGRDL--AREGGDVIRSACKWSP-------ELAA [457] CHLORELLA AAANRVALEACTQARNEGRDL--AREGGDVIRAACKWSP-------ELAA [457] BRYOPSIS AAANRIACEACVQARNEGRHL--AREGGDVIRAACKWSP-------ELAA [457] coleochaete AVANRVALEACVQARNEGRDL--ARQGNDIIREACKWSP-------ELAA [457] LIVERWORT AVANRVSLEACVQARNEGRDL--AREGNEIIREACKWSP-------ELSA [457] DOUGFIR AVANRVALEACVQARNEGRDL--AREGNEVIREATKWSP-------ELAA [457] N.ACUMINATA AVANRLALEACVQARNEGRDL--AQEGNEIIREACKWSP-------ELAA [457] TOBACCO AVANRVALEACVKARNEGRDL--AQEGNEIIREACKWSP-------ELAA [457] PETUNIA AVANRVALEACVQARNEGRDL--AQEGNEIIREACKWSP-------ELAA [457] PEA AVANRVALEACVQARNEGRDL--AREGNAIIREACKWSP-------ELAA [457] ALFALFA AVANRVALEACVQARNEGRDL--AREGNEIIREATKWSP-------ELAA [457] BARLEY AAANRVALEAXXXXXXXXXXX--XXXXXXXXXXXXXXXX-------XXXX [457] MAIZE AAANRVALEACVQARNEGRDL--ARE---IIKAACKWSA-------ELAA [454] RICE AAANRVALEACVQARNEGRDL--AREGNEIIRSACKWSP-------ELAA [457] SPINACH AVANRVALEACVQARNEGRDL--AREGNTIIREATKWSP-------ELAA [457] [ 510 520 530] [ . . . ] RHODOSPIRILLUM_II AFESFPGDADQIYPGWRKALGVEDTRSALPA- [466] RHODOBACTER_II AFESFPADADKFYPGWRDRLHRAAXXXXXXX- [464] Rhodobacter_cap_II AFESFPNDADKLYPGWRVALGVNXXXXXXXXX [467] hydrogenovibrioII AFESFPGDADKIFPGWREKLGVHKXXXXXXX- [470] thiobacil_denit_II DFKSWAGDADEIYPRWRKSMGV---------- [457] Gonyaulax_II AFLTFQKDSDQIYPGWKEKLGYTGESSVQAAS [511] XANTHOBACTER ALDTWGEVTFNYASTDTSDFVPTASVA-X--- [489] RHODOBACTER_1 ALDTWGNITFNYTSTDTSDFVPTASVAMX--- [487] ALCALIGENES_c_ATCC RARYWGDITFNYTPTDTSDFVPTASVA----- [487] alcaligenes_c_H16 ALDTWGDISFNYTPTDTSDFAPTASVA----- [485] alcaligenes_p_H16 ALDTWGDISFNYTPTDTSDFAPTASVA----- [486] CRYPTOMONAS ALDLWKDITFNYASTDTADFVETATANKX--- [489] CYANIDIUM ALDLWKDITFNYTSTDTSDFVETPTANIX--- [494] ANTITHAMNION ALDLWKDITFNYTSTDTADFVETPTANVX--- [489] PORPHYRIDIUM ALDLWKDISFNYTSTDTADFVQTPTANVX--- [489] ahnfeltia ALDLWKDISFNYTSTDTADFVETPTANVX--- [493] ECTOCARPUS ALDLWKDITFDYTSTDTPDFVEVATGSRX--- [489] PYLAIELLA ALDLWKDITFDYTSTDTPDFVEVATESRX--- [489] OLISTHODISCUS ALDLWKGITFNYTSTDTADFVETATSNPX--- [489] CYLINDROTHECA ALDLWKDISFNYTSTDTADFAATSTANVX--- [491] Mn_bacterium ALETWKDVTFNYTSTDSPDYAVTATASV---- [486] hydrogenovibrioIa AMETWKEIKFEFDTVDKLDLSHKXXXXXXXXX [481] hydrogenovibrioIb ALETWKEIKFEFDTVDKLDVQXXXXXXXXXXX [482] pseudomonas_hy AMETWKEVKFDFDTVDKLDVQHRXXXXXX--- [480] thiobacil_ferr_fe1 ALETWKEIKFEFDTVDKLDVVNR--------- [473] thiobacil_ferr_ATC AMETWKEIKSEFDTVDKLDVAHK--------- [473] Thiobacil_denit_I AMETWKEIKFEFDTVDKLDVAHK--------- [473] CHROMATIUM_A AMETWKEIKFEFDTVDKLDIAHKXXXXXX--- [478] CHROMATIUM_L AMETWKEIKFEFDVVDKLDAAXXXXXXXX--- [479] ALVINO_symb AMETWKEIKFEFDTVDKLDVAHKXXXXXX--- [477] nitrobacter AMETWKEIKFEFETMDKLAVANKXXXXXX--- [478] synechococcus ACELWKEIKFEFEAQDTIXXXXXXXXXXX--- [485] synechocystis ACELWKEIKFEFEAMDTLXXXXXXXXXXX--- [481] ANABAENA ACELWKEIKFEFEAMDTVXXXXXXXXXXX--- [487] ANACYSTIS ALDLWKEIKFEFETMDKLXXXXXXXXXXX--- [483] PROCHLOROTHRIX ACELWKEIKFEFEAIDTLXXXXXXXXXXX--- [481] prochlorococcus XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- [495] prochloron XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- [495] CYANOPHORA ACEVWKEIKFEFETIDTIXXXXXXXXXXX--- [486] EUGLENA ACEVWKEIKFEFETIDKLXXXXXXXXXXX--- [486] pyramimonas XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- [494] C.MOEWUSII ACEVWKEIKVEFDTIDKLXXXXXXXXXXX--- [486] CHLAMYDOMONAS ACEVWKEIKFEFDTIDKLXXXXXXXXXXX--- [486] CHLORELLA ACEVWKEIKFEFETIDTLXXXXXXXXXXX--- [486] BRYOPSIS ACEVWKEIKFEFETIDTLXXXXXXXXXXX--- [486] coleochaete ACEVWKEIKFEFETIDTLXXXXXXXXXXX--- [486] LIVERWORT ACEIWKEIKFEFDIIDTLXXXXXXXXXXX--- [486] DOUGFIR ACEVWKEIKFEFDTIDYLXXXXXXXXXXX--- [486] N.ACUMINATA ACQVWKEIVFNFAAVDVLDKXXXXXXXXX--- [486] TOBACCO ACEVWKEIVFNFAAVDVLDKXXXXXXXXX--- [486] PETUNIA ACEVWKEIRFNFAAVDVLDKXXXXXXXXX--- [486] PEA ACEVWKEIKFEFPAMDTLXXXXXXXXXXX--- [486] ALFALFA ACEVWKEIKFEFPAMDNXXXXXXXXXXXX--- [486] BARLEY XXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- [486] MAIZE ACEIWKEIKFDGFKAMDTIXXXXXXXXXX--- [483] RICE ACEIWKAIKFEFEPVDKLDSXXXXXXXXX--- [486] SPINACH ACEVWKEIKFEFPAMDTV--XXXXXXXXX--- [484] ; END; begin paup; exclude 1-21 519-. ; delete TOBACCO PETUNIA SPINACH PEA ALFALFA BARLEY MAIZE; [superfluous plants] delete PYLAIELLA CHLAMYDOMONAS ; [superfluous algae] outgroup RHODOSPIRILLUM RHODOBACTER_2 Rhodobacter_cap_2 hydrogenovibrioII thiobacillus_denit Gonyaulax; endblock; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE=unord PolyTcount=MINSTEPS ; END; BEGIN MACCLADE; v 3.0 -1421072597 1100&/0 0 0 END;