Supports the AIDS RideHere are the Questions submitted by your recitation groups.  They are designed to assist you with your study/review for the final...

Please bring some of my LARGER friends to help Shelly join the AIDS ride, and we can help two great local organizations in their fight against AIDS!

Q:  Explain the events of how the frequency of action potentials on the presynaptic neuron determines the magnitude of the response of the post synaptic structure.  This question ensures that we know what events are going on.

A:
1. Frequency of AP on presynaptic neuron determines the # & for how long voltage-gated Ca++ channels are open 
2. which determines the # of vesicles released 
3. which determines the # of vesicles docked at the presynaptic neuron to yield NT's to synaptic cleft by exocytosis 
4. which determines the # of NT's released into the synaptic cleft 
5. which determines the # of receptors occupied on post synaptic neuron 
6. which determines the magnitude of response of postsynaptic structure
Q:  What is the function of MLCK?
A:  It regulates smooth muscle activity by phosphorylating the light chain region of the myosin so that it can bind to actin, which allows for a contraction of the muscle.
Q:  How should the conductance of Na+ or K+ be changed to increase the heart rate?  Explain.
A:  Increase gNa+ or decrease gK+; this allows the rate of spontaneous depolarization to increase.
Q:  How should the conductance of Na+ or K+ be changed to increase the heart rate?  Explain.
A:  Increase gNa+ or decrease gK+; this allows the rate of spontaneous depolarization to increase.
Q:  As the concentration of Epinephrine in the blood stream increases what happens to the glycogen concentration in the liver cells?
A:  D[ecreases]
Q:  Design an experiment to isolate microtubules. 
A: 
Step 1:  Blend cells in an isotonic buffer to isolate organelles. 
Step 2:  Put in depolymerization conditions: cold, high [GDP], low [Mg++], high [Ca++] 
Step 3:  Centrifuge and remove pellet (which contains organelles) 

Step 4:  Put supernatant in polymerization conditions: heat, high [GTP], high [Mg++], low [Ca++], taxol(drug to stabilize microtubules)

Q:  What are the three problems a cell faces relating to size? 
A:
Surface Area to Volume ratio
Diffusion Distance
Concentration of required substances in intracellular fluid
Q:  What is the cyclic cycle in photosynthesis and why does it occur? 
A:  The cyclic cycle occurs when NADPH concentration is high, and the plant undergoes solely ATP synthesis.  This occurs by running photosystem one in a circle, where the electron at the end of the chain is dumped back onto p700 to go through the cycle again.
Q:  What are the properties of simple diffusion?
A:
-  down concentration/electrical gradient
-  increase in entropy 
 -  no energy required 
 -  works both directions 
 -  diffusion through membrane 

 -  no Vmax or Ka 

 -  no selectivity; no competative inhibition

Q:  Describe the structure and function of RNA polymerase? 
A:  Five Subunits 
 -  2a subunits 
 -  2b subunits 
 -  1 sigma factor or subunit 

It has two functions -

(1) to catalyze the addition of nucleotides 
(2) helicase unwinding
Q:  What are the two ways of generating ATP in Cellular Respiration? How much is produced by each? 
A:
Substrate-level phosphorylation: 4 ATP
Chemiosmotic Synthesis: 32 ATP
Q:  Briefly explain the steps of amino acid polymerization during mRNA translation beginning with the post-transcriptional product and ending with the polypeptide.  Use diagrams as necessary.
A: 
 -  after post-translational modification, the 30S subunit binds to mRNA 
 -  the 50S subunit then comes in and completes the complex, attatching near the start codon (AUG) 
 -  tRNA, which has an anticodon complementary to the mRNA codon, binds to the appropriate amino acid and brings it to the A site on the 50S subunit 

 -  tRNA-amino acid complex shifts to the P site.  A new tRNA-amino acid moves into the A site. 

 -  a peptide bond is formed between the amino acids at the P site 

 -  the first amino acid moves to the E site and tRNA is released 

 -  a new tRNA-amino acid moves into the A site and this process continues until a stop codon is reached (UAG, UGA, UAA) 

Q:  Explain the makeup of thin filaments. 
A:  Thin filaments are composed of a strand of f-actin (from g-actin monomers) with the polypeptides tropomyosin and troponin (consisting of TnI, TnC, and TnT) intertwined around the actin strand. 
Q:  How does epinephrine increase the heart rate? 
A:  It binds to an adrenergic receptor on the heart, which increases the conductance of sodium and decreases the conductance of pottasium.  Therefore, depolarization occurs faster. 
Q:  Describe the starting and ending materials, as well as location, of the steps involved in aerobic respiration. 

 
A: 
glycolysis--> 
Start-6C, 2NAD+, 2ATP 
end-2 3C pyruvate, 4ATP(net gain of 2), 2NADH, 2H+ 
location-cytosol 
pyruvate oxidation--> 
start-2 3C pyruvate, 2 NAD+, 2 Coash 
end-2 CO2, 2 2c Acetyl CoA, 2 NADH, 2H+ 
location-matrix 
citric acid cycle--> 
start-2 Acetyl CoA, 2 FAD+, 2NAD+ 
end-6 NADH, 2FADH2, 4CO2, 2ATP 
location-matrix 
ETS--> 
start-10 NADH, 2 FADH2 
end-H2O, 34 ATP, 10 NAD+,2 FAD+, establishes proton gradient 
location-intermembrane to matrix